| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0783 |
|---|
| Symbol | |
|---|
| ID | 5298403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 824613 |
|---|
| End bp | 825818 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640769061 |
|---|
| Product | competence/damage-inducible protein CinA |
|---|
| Protein accession | YP_001306030 |
|---|
| Protein GI | 150020676 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAT CTATAATTTT GGCAATTGGG AACGAATTAG TTGAAGGAAT TATCATAGAT
ACAAACTCAA AATACATATC AAAAAAGCTT TTAGAAATTG GCTACAAAAC CGTTGCAATT
AATACCTTGC CTGATGATTT AGAAATATTG GTGGAAGAAA TTAGAGATTC ATTAAAAAAA
GCTGATCTGT TAATTACAAC AGGGGGACTT GGCCCCACAG AAGATGACTT AACTAGAGAG
GCAATTTCCA AAACTGTTGG AAAAGAACTA ATTTTTAATG AAAAACTATA CAATTCCATT
TTGAAAAAAG TTAAAGAATT CCATAGTGAA ATACCAAAAA ACATAGAAAA ACAAGCATGG
GTAATAAACG GTGCAAGGAT AATAGAAAAT CCAGTTGGAA CTGCTCCAGG ACAAATTTTA
CAAATCGGTG AAAAACAAAT AATAATCTTG CCAGGTCCAC CTGTTGAAAT GAAACCCATT
TTCGAAGAAT CATTAAAGTT TTTAGAAAAA TTTGAAAAAA TTTATCAAAA AAGAATAAAA
ACTTTAGGAA TCCCAGAAGC TATTTTAGTG GAAAAATACA AAGACATAAT TTACAAATAC
AAGGACGTAA ATGTGGCAAC TCTAGCAAGT CATATTTCAG GGGTAGAGCT AAGGTTTACC
GGTAAAAAAG AAAAAGTAGA TGAAATAGTA AAGTTACTAA AAGAAAAACT TTCAGACCAC
ATTTACGCTC TTGACAATGA AACTATTGAA GAAGTCGTTT TTAAAAAGTT AGAAGGAAAA
TCTGTATCTT TTGCTGAATC TTGTACAGGT GGACTTATTT CAGCAAAATT TGTTAGTATA
CCCGGTATTT CAAAAGTCTT TAAAGGCGCA ATTGTTGCAT ATTCAAACAA AGTAAAAGAA
AAAGTATTAA ATGTAAACAA AAACACTATC CAAAAATATG GAGCAGTTAG TAAAGAATGC
GTTATGGAAA TGGCAAAGGA AGTAAGTTAT TTTCTAGATA CAGATTATGC TGTTGCCGTA
TCAGGTATCG CTGGCCCTAC AGGTGGAACG AAAGAGAAAC CCGTTGGAAC AGTTTGGATA
TGTGCATATA AAAGAGAAAA TGATTACTAT CTGGTAGAAA AATTTTTCTT TAGAGGTAAT
AGAGAAATAA TAAGGGAAAA ATCTGCACTA AACGCATTTA ATTTATTGAG GAGGATTTTA
TCATGA
|
|---|
| Protein sequence | MKKSIILAIG NELVEGIIID TNSKYISKKL LEIGYKTVAI NTLPDDLEIL VEEIRDSLKK
ADLLITTGGL GPTEDDLTRE AISKTVGKEL IFNEKLYNSI LKKVKEFHSE IPKNIEKQAW
VINGARIIEN PVGTAPGQIL QIGEKQIIIL PGPPVEMKPI FEESLKFLEK FEKIYQKRIK
TLGIPEAILV EKYKDIIYKY KDVNVATLAS HISGVELRFT GKKEKVDEIV KLLKEKLSDH
IYALDNETIE EVVFKKLEGK SVSFAESCTG GLISAKFVSI PGISKVFKGA IVAYSNKVKE
KVLNVNKNTI QKYGAVSKEC VMEMAKEVSY FLDTDYAVAV SGIAGPTGGT KEKPVGTVWI
CAYKRENDYY LVEKFFFRGN REIIREKSAL NAFNLLRRIL S
|
|---|
| |