| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0779 |
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| Symbol | |
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| ID | 5297987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 820268 |
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| End bp | 822160 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769057 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001306026 |
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| Protein GI | 150020672 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAG ACTTAAAGCT CAAACTTGAT GAAGAACAAT ATAAAGCGGT TGTAGAATCA
AGCGGGAAAA CACTTGTAAT TGCAGGTCCA GGAAGCGGAA AAACAAGGGT AATAACTTAC
AAGATAGCAC ATCTAATAGA TTCTGGAATA AAACCAAACG AAATAATGCT CGTAACATTC
ACAAAAGCCG CAGCAAGGGA AATGCTTCAA CGCGCAAAAG TAGTCTCAAA ATCAAATCTA
AACGGAATAA CAGCAGGTAC CTTTCACCAT GTATGTAACT TATTCTTAAG GCGATATGGT
AGACTAATAG GATTAAAATC AAATTTTACC ATACTGGACA GCGAAGATGC AAAAGATCTT
ATGGAAAGCA CAAGAAGCCA ACTCATACCA AAATCAGAAA GAAAAACTAT CCCAACGGCA
AAACAACTAC TTTCCATCGC TTCATACATG AACAATACAC TTACATCCCT TAGAGAAGCA
ATTGTAAAAT ACAACCCAAG ATATTTAGAA CAAGAACATA CAATAGAACA AATATTGGTC
AGGTACCAAC AAGAAAAACA AAATCAAAAT GCCGTTGATT ACGATGATCT ACTGATACAC
ACATTACAAA TATTGTCAAC TAACAAAGCA ATAAGACTAA AAGAATCGGA AAAATACAAA
TGGATACTGG TAGATGAATT TCAAGACACA AACATTGTAC AATTCAAAAT CGTAGAACTT
TTATCCACAG TACACAAAAA CCTAATGGTA GTAGGAGATG ATGCACAAAG TATTTATTCC
TTTAGGGGAG CTCGTTTTGA AAATGTAATA GATTTTCAAA AAGAAGCTAC TACGTTTAAA
ATACAAACAA ACTATAGAAG CTCACAAGAA ATAGTTAATT TTATAAATGA AATGCTCCCC
AAAAAGTCAA TAAAAAAGAA ACTTAAAGCA ACAAGAACAA CGGGAATAAA GCCATTTCTT
GTTCAAGTCT TTGATCACTA CGATGAAGCA GACTTTGTAG CAAATGAAAT ACTAAACTTC
CAACACAACG GTATATCCTT AAATGAAATA GCTGTCCTGT ATCGAGCACA TGCCCATTCC
CTCGAACTAC AATTAGCACT TTCAAAACAC AACATCCCAT TCAAACTCTA TTCTGGATTA
CGTTTTACCG AAACAGCGCA CGTAAAGGAT TGTCTTGCAT TTCTAAAGAC AACGGTAAAT
TTTGAAGAAA AAATCTCTTG GATAAGAATA TTAAAACTCG CAACTGGAAT TGGAAATATA
AAGGCAGAAA ATTATGCCGA AAAACTATCA AAACATGGAT ATGACGCATT CAATGAGATA
AAGGAAAAAA GCAAAGATTT CCACATATTA AGAGACACAA TAAAAGAAGC AATTGATATA
CAAAACCCAG GCGAAAGGAT AAAACTCTTT TACATAAACT TTTACAACAA AAAGATGGAA
GAAAAATTTG AAGATTATAG AGAAAGAAAA GAGGATATCG AAAGATTAAT AGAGATGGCA
ACATTTTACA AAATACCAGA ATTATTCTTA AATGATATAC TGGTAAGTGA AAGCTACGAA
ATAGAAAGCG AAAACTCTGA AAAGGAAAAA GTAACACTTA CAACTGTTCA TCAGGCAAAA
GGGTTAGAAT GGAAAGTGGT ATTCATACTA AGTGTTAATC CTGGCGATTT TCCACATATT
ATGAGCTTTA GAGAAAACAA CCTAGATGAA GAAGAAAGGC TTTTTTATGT AGCTATTACA
AGGGCTAAAG ATTATTTGTA CATAATACAC AGTGTGGGAG GTTCATCAAG AATATTTTAC
GGAAATGATT ATATATTAAG ACGAGGAAAA AGTTTTATTG ATGATATTCC TTTCCATCTA
GTAGAACATC TTGAGTATGG TGTTGAAAAA TGA
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| Protein sequence | MIEDLKLKLD EEQYKAVVES SGKTLVIAGP GSGKTRVITY KIAHLIDSGI KPNEIMLVTF
TKAAAREMLQ RAKVVSKSNL NGITAGTFHH VCNLFLRRYG RLIGLKSNFT ILDSEDAKDL
MESTRSQLIP KSERKTIPTA KQLLSIASYM NNTLTSLREA IVKYNPRYLE QEHTIEQILV
RYQQEKQNQN AVDYDDLLIH TLQILSTNKA IRLKESEKYK WILVDEFQDT NIVQFKIVEL
LSTVHKNLMV VGDDAQSIYS FRGARFENVI DFQKEATTFK IQTNYRSSQE IVNFINEMLP
KKSIKKKLKA TRTTGIKPFL VQVFDHYDEA DFVANEILNF QHNGISLNEI AVLYRAHAHS
LELQLALSKH NIPFKLYSGL RFTETAHVKD CLAFLKTTVN FEEKISWIRI LKLATGIGNI
KAENYAEKLS KHGYDAFNEI KEKSKDFHIL RDTIKEAIDI QNPGERIKLF YINFYNKKME
EKFEDYRERK EDIERLIEMA TFYKIPELFL NDILVSESYE IESENSEKEK VTLTTVHQAK
GLEWKVVFIL SVNPGDFPHI MSFRENNLDE EERLFYVAIT RAKDYLYIIH SVGGSSRIFY
GNDYILRRGK SFIDDIPFHL VEHLEYGVEK
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