Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0746 |
Symbol | |
ID | 5297612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 785455 |
End bp | 786276 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640769025 |
Product | Cof-like hydrolase |
Protein accession | YP_001305994 |
Protein GI | 150020640 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATAAAAC TTATTTTAAC AGATTTAGAT GGGACATTGT TAAATGATGA AAAACACATT CCAGAAAGAA ATAAAATTGC TTTGAAAAAG GCAATGGACA AGGGAATCCA TGTAAGTATA GCCACAGGTA GAAATTATTA TTCGGCAAAA AAATATGTAG AAGAACTTGG GTTGGATGTA CCTGTTGTTT TCCAAAATGG TGCATTTATA TACATGCCAT TTGAAAACAA AATTTTGTAT GAAACTCCGT TACATTCAGA TATAGCAAAA CAGTTGATAG ATTTTGCAAG AGATGAAGGT TTAGATTATA TTTTATTTTC GGACTTTTTT GATGAAAAGG ATATGTACAT GGACAAAGAA CACCAAGGAG GATATGTAAA ATATTTGCAG CAAAATAGTT GGAGAATAAA TAAAGTAGAT GATGTTAAAA AGTACATACT TGAAGATACC GTAGCAGAAG TGGTGTTAAT GGGAAAAGAG GACAAAATTT TAAAGGTTGT TGAGATTTTA AGAAGAAAAT ATCAGGGAAA ATTTAGCGTG GTTAAAAATA ATGTTATTGA TGGATGGGCT TTCTTTGAGT TTTTTGGAAA AGGTGCATCT AAAGAGGATG CTTTGAGATT TTTACTTGAC TATTTTGGTG TTTCTGAAAA TGAAACGATG TTTTTGGGAG ATAGTTACAA CGATATAGGA ATTATGAAAT TAGTAGGATT TCCAGTTGCT ATGGAGAATG CGTTTGAAGA AGTAAAGAAA GTAGCAAAGT TTGTGACACT TTCTAACAAC GATGGGGGAG TAGGTTTTGC GGTGGAAAAG TTTGTGCTTT AG
|
Protein sequence | MIKLILTDLD GTLLNDEKHI PERNKIALKK AMDKGIHVSI ATGRNYYSAK KYVEELGLDV PVVFQNGAFI YMPFENKILY ETPLHSDIAK QLIDFARDEG LDYILFSDFF DEKDMYMDKE HQGGYVKYLQ QNSWRINKVD DVKKYILEDT VAEVVLMGKE DKILKVVEIL RRKYQGKFSV VKNNVIDGWA FFEFFGKGAS KEDALRFLLD YFGVSENETM FLGDSYNDIG IMKLVGFPVA MENAFEEVKK VAKFVTLSNN DGGVGFAVEK FVL
|
| |