| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0736 |
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| Symbol | |
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| ID | 5298079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 775390 |
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| End bp | 777837 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640769015 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001305984 |
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| Protein GI | 150020630 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAAGG GTATTTTGTT ATTTTTGGTA ATATTACTAA TTTTTTCTTC TTGTGTAAAA
ACATCACCAG TTATATTAAA CATTTCACTT TATGGAGACA TTGAAAAACT GGATAGTTCT
AAAACATTCA AAGTTCAAAG TTTCGAAGAA AACATACAAA TAGAAAGATA TAAATTAAAG
ATACTCCAAG AAAAAAAACT AATATTTGAG AAAGACATTA CTACAAATTT TCACATCAAC
CTTGGTGAAA TTATTCCTGG GAAATATACA ATTAGAATTG ATGCATATGA AAAAGATAAT
CTAATACTTT ACGGCGAAAA AGAAGCGTTA CTATCATACG GCGAAAACAA CATCACAATA
TATACGCGCT TTACAAATGG AAAATTAGTT ATAACCCTAT CTTCTGATGG AAATACAATA
ACTCAATCAA AAATTACAGG AACGCTACCT GCTTCTCCTG TAAATACATT TATTGAAGAA
AATAAAACAT ATATAGAAAA AGAAGTCTAT CCTGGTGTAT GGGAAATAAC CATAGATGCA
ACCCTAAATG ATAATATTAA CAAAAACTAC AACACGGTAA TAGAAATTTT ACCGTCAAAA
ACAAAAGAAA TAAATTTTGA AATAAACAAC AGTGGTATCA CTATCATGCC TGTGCTCCCA
TATCTTGAAA AAATAAATAA TACAACTGCA CAATTAGACA ACGAGGGAAT AAAACTTTAT
TGGGACTACG ACCTACCCGC AACCTTTTGG ATATACAAAG GTTCAAATGA TTTTGATATA
TCATTCGTTG GAACTACAAC AAATAATTAT TTCATCGATA AAAATCCATT AAAAGAAAAA
TATTTCTACT ATGTTAATGC AATACTTGAC GGAAAAGAAA GCGGATTAAC AAAAATTGAT
GCAAAAAAAA TTATTGATGA AATTTTCTCC TCAAACATTA TGTACCTTTT ATTCGTAAGA
TCGTTTTTTG ATAGCAATAA CGATGGCATA GGTAATTTAA AAGGAATCAC TCAGAAAATG
GATTATTTAA AAGATTTAGG TATAAGCGTT ATATGGCTCA TGCCCATATT CAAAGCTACA
TCATATCACG GTTACGATGT AGTTGATTAC TATAACATAA ATCCTGAATA TGGAACAATT
GAAGATTTAA AAGAATTACT GGAAAAGGCT CATGAGAATA ACATAAAGGT TATTTTAGAC
ATACCTTTAA ACCACAGCTC TGATGAAAAT ATATGGTTTA AAGACGCGAT TGAAAATACT
ACCAATTCAA AATATTGGAA TTACTACATC ATGAGCCTTG AAGAGAAAAA TGAACCACAT
TGGCATTACA AAATAAACTC AAAAGGTAAA AAGGTATATT ATTTTGGAAT ATTTAGTCCA
TCTATGCCCG ATTTTAACTT AAATAACGAG GAAGTAAAAA AACTACATAA AGAAATATTA
AGCTATTGGA TAAATTATGG AGTTGATGGT TTTAGATTTG ACGCTGTAAA ACATTTCTTT
GGAGATGATT GGGATAATGG AATAGAAGAT TCAAGTAAAT ATTCCCAAGA ATTAGCAAGG
TATGTAAAAT CAATAAAGAA AGATGCCATA ATCGTAGGAG AAGTATATGA TGGTAACATA
GATACGTTAA AAAAATTTGC TCCAATGCCT GTGTTTGATT TTAATTTTAT GTTCAATATA
AGAGAAAATT TTGAAGGAAA AGATAACCTC TTATCTACTT GGTATAAAGA GGTGAATTAT
GAAGAAATTA CACCAAACTA TTTTCCATTT ATCAACAATC ACGACTTAAA TAGATTTATA
TCAGTCTTGT GTGATGAAAA ATACAAAGAT ACATATCACG GGACAATACA ATTTGCATTA
CTTAATAGCT TACTTGTAAT GTTAGAAGGG CTACCTACTA TATATTACGG TGATGAAATT
GGTTTAAAAG GCTTTAAATG GAATGGGCCA GTTTATGATG AGCCTGTTAG AGAACCTATG
CAGTGGTATG CCTCACAAAG CGGAGAGGGA CAAACGAATT GGACAAAAGA AATCTATATA
TCAAACAATA TCACATTTGG AAATGCAAAT ATAGATGGTG CAATATACGA TGATCCATAC
GATGGTATAT CAGTTGAAGA ACAGGAAAAT GAAAATTCTT TGCTAACTTA CTTTAAAACC
CTCTTTAATT TAAAAAAGGA ATACTACTCT CTTTCACATG GAACAGTTGA AATATTAAAA
AATTGGAAAA ACCTAATTGT CTTGAAAAAA ACTTATTTTA GCCAAGAGGC TTTGGTAATA
TTTAACTTAG ATCCATTCTA TTCAAACAAT TTTACAATTC CAAAAGATTA CAAACAAATC
TTTTATGCTA ACCTAAATGA TTTTACTTTT GAAAAAGTTG AAAAGATTAT AGAAAAAGAT
ACAAATTACA TTATTAACCC AAGACAAGTT TATATATTTA TAAAATAA
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| Protein sequence | MKKGILLFLV ILLIFSSCVK TSPVILNISL YGDIEKLDSS KTFKVQSFEE NIQIERYKLK
ILQEKKLIFE KDITTNFHIN LGEIIPGKYT IRIDAYEKDN LILYGEKEAL LSYGENNITI
YTRFTNGKLV ITLSSDGNTI TQSKITGTLP ASPVNTFIEE NKTYIEKEVY PGVWEITIDA
TLNDNINKNY NTVIEILPSK TKEINFEINN SGITIMPVLP YLEKINNTTA QLDNEGIKLY
WDYDLPATFW IYKGSNDFDI SFVGTTTNNY FIDKNPLKEK YFYYVNAILD GKESGLTKID
AKKIIDEIFS SNIMYLLFVR SFFDSNNDGI GNLKGITQKM DYLKDLGISV IWLMPIFKAT
SYHGYDVVDY YNINPEYGTI EDLKELLEKA HENNIKVILD IPLNHSSDEN IWFKDAIENT
TNSKYWNYYI MSLEEKNEPH WHYKINSKGK KVYYFGIFSP SMPDFNLNNE EVKKLHKEIL
SYWINYGVDG FRFDAVKHFF GDDWDNGIED SSKYSQELAR YVKSIKKDAI IVGEVYDGNI
DTLKKFAPMP VFDFNFMFNI RENFEGKDNL LSTWYKEVNY EEITPNYFPF INNHDLNRFI
SVLCDEKYKD TYHGTIQFAL LNSLLVMLEG LPTIYYGDEI GLKGFKWNGP VYDEPVREPM
QWYASQSGEG QTNWTKEIYI SNNITFGNAN IDGAIYDDPY DGISVEEQEN ENSLLTYFKT
LFNLKKEYYS LSHGTVEILK NWKNLIVLKK TYFSQEALVI FNLDPFYSNN FTIPKDYKQI
FYANLNDFTF EKVEKIIEKD TNYIINPRQV YIFIK
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