| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0642 |
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| Symbol | rplK |
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| ID | 5297283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 680814 |
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| End bp | 681239 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640768919 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001305891 |
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| Protein GI | 150020537 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0270272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAA AGGTAGTTGC ACAAGTTAGG TTGCAACTTG AAGCTGGAAA AGCAACTCCA
GCACCACCGG TTGGTCCTGC TTTAGGTCAA CGTGGTGTAA ACCTTATGGA ATTTTGTAAG
AAGTTTAACG CTGCAACGGC TGATAAAGCT GGTATGATTA TCCCTGTAAT AATCACTGTT
TACGAAGATA GGTCATTTAC ATTCATAACA AAAACTCCAC CCGCTTCTTT CTTGTTGAAA
AAAGCTGCTA AATTGAACTC TGGTTCTCAA GAACCTAAGA GAAAGATAGT TGGAAAAGTC
ACGAGAGAAC AAATTAAGGA AATAGCTGAA ATCAAAAAAG AAGACCTAAA CGCGAACGAC
ATTGAAGCAG CTATGAAAAT CATTGAAGGA ACAGCAAAAA GTATGGGAAT TGAGGTAGTA
GACTAA
|
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| Protein sequence | MAKKVVAQVR LQLEAGKATP APPVGPALGQ RGVNLMEFCK KFNAATADKA GMIIPVIITV
YEDRSFTFIT KTPPASFLLK KAAKLNSGSQ EPKRKIVGKV TREQIKEIAE IKKEDLNAND
IEAAMKIIEG TAKSMGIEVV D
|
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