Gene Tmel_0628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0628 
Symbol 
ID5297587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp669769 
End bp670692 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content32% 
IMG OID640768900 
Productsignal transduction protein 
Protein accessionYP_001305877 
Protein GI150020523 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase)
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATATAC TTGAAAAAGT ACAATCTATA TTTTCACACA TGAAGGTATC TGAATTTATG 
AATAGTGATG TTATTTACGT TTTGCCAAAT AGAACAATAA TGCAAGTAAA GGAAATTTTA
AGATTAAAGA GAATATCTGG TGTACCCGTT GTAGATTCTC AAAAAAAGGT TATTGGGATT
ATAAGTATTG AAGATATAAT AAGGAGTATA GAAAAAAATC AGCTTGACAG TCTTGTTGAA
GAACAAATGA CACGTAGAGT AATTACAGTA GAGCTAGACG CTACGTTACG TGATGTTATG
GAACTATTTG AAAAGTATGG ATATGGACGG TTTCCCGTTG TTGATGAAAA GAAAAGGTTG
GTTGGTATTG TAACAAAAAA TGACATTTTA AAAGCGGTTG CTATGAAATT AGGTATTTTA
TATTTACATG ACGAAAGAAG GAAAAAGGCA TTAGATGAAG ATATTGAGAA ATCTTTGATT
ACAGGTACGA GTATTAATAA AAGTGATAGT GATTTTTACT TTAAGATAGA TTACTATGAC
ATAAATTCAA TAGGCATAGG CGCAGCACAA TTAAAGAAGT TCTTGCTTAC AAAAGGGATA
GATGAAAAGT TGGTAAGAAG GATAGCAATA AGTGTTTATG AGGCGGAGGC AAATGTTGTT
ATCCACAGTG GAAGTACAGG TGAAATCTAT TGCTTTATCA AAGAAGATAG TATTGTTGTA
AGGGTAGAAG ATAAAGGTAA AGGTATTGAA AATTTGGAAC TTGCCATGAA AGAAGGTTTT
TCTACTGCAC CTGATCACGT AAGGGAATTG GGATTTGGCG CAGGTATGGG ACTTCCAAAT
ATAAAAAGAT ATTCTGATAA AATGGTTGTT CTTTCGGAAA AAGACAAGGG AGTTATAGTG
GAAATGATTT TCTTTATAAA TTAA
 
Protein sequence
MDILEKVQSI FSHMKVSEFM NSDVIYVLPN RTIMQVKEIL RLKRISGVPV VDSQKKVIGI 
ISIEDIIRSI EKNQLDSLVE EQMTRRVITV ELDATLRDVM ELFEKYGYGR FPVVDEKKRL
VGIVTKNDIL KAVAMKLGIL YLHDERRKKA LDEDIEKSLI TGTSINKSDS DFYFKIDYYD
INSIGIGAAQ LKKFLLTKGI DEKLVRRIAI SVYEAEANVV IHSGSTGEIY CFIKEDSIVV
RVEDKGKGIE NLELAMKEGF STAPDHVREL GFGAGMGLPN IKRYSDKMVV LSEKDKGVIV
EMIFFIN