Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0628 |
Symbol | |
ID | 5297587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 669769 |
End bp | 670692 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640768900 |
Product | signal transduction protein |
Protein accession | YP_001305877 |
Protein GI | 150020523 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGATATAC TTGAAAAAGT ACAATCTATA TTTTCACACA TGAAGGTATC TGAATTTATG AATAGTGATG TTATTTACGT TTTGCCAAAT AGAACAATAA TGCAAGTAAA GGAAATTTTA AGATTAAAGA GAATATCTGG TGTACCCGTT GTAGATTCTC AAAAAAAGGT TATTGGGATT ATAAGTATTG AAGATATAAT AAGGAGTATA GAAAAAAATC AGCTTGACAG TCTTGTTGAA GAACAAATGA CACGTAGAGT AATTACAGTA GAGCTAGACG CTACGTTACG TGATGTTATG GAACTATTTG AAAAGTATGG ATATGGACGG TTTCCCGTTG TTGATGAAAA GAAAAGGTTG GTTGGTATTG TAACAAAAAA TGACATTTTA AAAGCGGTTG CTATGAAATT AGGTATTTTA TATTTACATG ACGAAAGAAG GAAAAAGGCA TTAGATGAAG ATATTGAGAA ATCTTTGATT ACAGGTACGA GTATTAATAA AAGTGATAGT GATTTTTACT TTAAGATAGA TTACTATGAC ATAAATTCAA TAGGCATAGG CGCAGCACAA TTAAAGAAGT TCTTGCTTAC AAAAGGGATA GATGAAAAGT TGGTAAGAAG GATAGCAATA AGTGTTTATG AGGCGGAGGC AAATGTTGTT ATCCACAGTG GAAGTACAGG TGAAATCTAT TGCTTTATCA AAGAAGATAG TATTGTTGTA AGGGTAGAAG ATAAAGGTAA AGGTATTGAA AATTTGGAAC TTGCCATGAA AGAAGGTTTT TCTACTGCAC CTGATCACGT AAGGGAATTG GGATTTGGCG CAGGTATGGG ACTTCCAAAT ATAAAAAGAT ATTCTGATAA AATGGTTGTT CTTTCGGAAA AAGACAAGGG AGTTATAGTG GAAATGATTT TCTTTATAAA TTAA
|
Protein sequence | MDILEKVQSI FSHMKVSEFM NSDVIYVLPN RTIMQVKEIL RLKRISGVPV VDSQKKVIGI ISIEDIIRSI EKNQLDSLVE EQMTRRVITV ELDATLRDVM ELFEKYGYGR FPVVDEKKRL VGIVTKNDIL KAVAMKLGIL YLHDERRKKA LDEDIEKSLI TGTSINKSDS DFYFKIDYYD INSIGIGAAQ LKKFLLTKGI DEKLVRRIAI SVYEAEANVV IHSGSTGEIY CFIKEDSIVV RVEDKGKGIE NLELAMKEGF STAPDHVREL GFGAGMGLPN IKRYSDKMVV LSEKDKGVIV EMIFFIN
|
| |