Gene Tmel_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0616 
Symbol 
ID5296709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp658247 
End bp658807 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content33% 
IMG OID640768887 
Productglycerol-3-phosphate responsive antiterminator 
Protein accessionYP_001305865 
Protein GI150020511 
COG category[K] Transcription 
COG ID[COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGACG TGCATCCATT TGTATATCCT ATAGTGCCTG CAATAAGAGA TTTAAAATTT 
GTTGAAAAAA TTGTACAAAT TCCCGTGTCT TCGGTTTTTT TACTAGAGGG AGATATATTC 
AATACACAAA ATGCAACGCA AAAGTTAAAG GAAAATGGAA AAAAAGTTTT TGTACATATT 
GACCTTATTA ATGGTCTGGG AAGGGATGAA GCAAGTGTAA AGCTTGTAAA AGAATTTGTA 
TGCGCAGATG GAATAATCAC AACAAGATCC AATCTTATTG TTTTTGCAAA CAGAATAGGA 
TTAATGACAG TTCAAAGGAT TTTTTTAATA GACTCAAAAG CTGTTGAAAC GGGTATTCAG 
CAGATAAAAA AGCATAAAGC TAATTTTGTG GAAGTTTTAC CTGGCCTTAT ACCAGATATG 
ATAAGGTTTA TAAAGCAGAG TGTAGAACAA CCCATTATTT CCGGAGGACT TGTAAGTACT 
GAAAATCAAG TGAAAAAAAT TTTAGCAGCG GGTGCAATTG CCGTTTCAAC AAGTAAGGAA 
AATTTATGGA ATATTTTTTG A
 
Protein sequence
MNDVHPFVYP IVPAIRDLKF VEKIVQIPVS SVFLLEGDIF NTQNATQKLK ENGKKVFVHI 
DLINGLGRDE ASVKLVKEFV CADGIITTRS NLIVFANRIG LMTVQRIFLI DSKAVETGIQ 
QIKKHKANFV EVLPGLIPDM IRFIKQSVEQ PIISGGLVST ENQVKKILAA GAIAVSTSKE 
NLWNIF