| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0597 |
|---|
| Symbol | |
|---|
| ID | 5296938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 629425 |
|---|
| End bp | 631626 |
|---|
| Gene Length | 2202 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640768859 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001305849 |
|---|
| Protein GI | 150020495 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.139339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATA TGAATGAATA TACAGAAAAT GTGCAAAGGG TTTTGATGGC AGTTACTGAT
GTTTTGACAA GGTATAAGCA AAATCAGATG TCTTCTGAAC ACATATTGCT TGCTATTTTA
GAAGATGAAA GAAATGCGGC AAAAGATATT TTAAAACATT TAAAAGTGGA AGTTTTTGAA
TTAAAAAAGG AAATAGAAGC ATTCATTTCA AGATATGGAG TAAAAGCAAA CGCTCCTGCG
GGTCAAATAT TTATTACTCC TGAAGCAAGA CATATCCTTG AAGAAGCAAG AAAAGAAGCA
AAAAGGATGG GGGATGAAAA GATAGGTACA GATCACATTC TTCTTGCAAT GACTATAATT
CCGGAAAGTA TGACTTATAG AATACTGTCA AGATATGGAG TATCTCAAGA TAGGATATAC
CAGGCAATAA AAGAGATAAG AACTTCTGGA GCAACTTCTG AAGAAGAAAA TATAGACGTA
TTGACAAAAT TTACGGAAGA TTTGACAGAA CTTGCAAGGA CAAATAGATT GCTTCCAGTT
GTTGGTAGAG AAAAAGAGAT TTTAAGGATT ATGGAGATTC TTGGTAGAAG GTTGAAAAAC
AACCCAGTTG TTATTGGTGA TCCGGGAGTT GGAAAAACTG CGATTGTAGA AGGCCTTGCA
CAGAGAATAG TAGAAAGAAA AGTACCGGAA TTTTTAAAAA ATAAAAGAAT TTTAAAACTT
GATTTAGCTC GAGTTATTGC TGGTACAAAA TTTAGAGGAG AGTTTGAAGA GAGATTGAAA
AAGATTGTGG ATATAGTTAA GAGAACACCA AATATAGTAC TGTTTATAGA TGAGATACAT
ATGGTTGTAG GTGCTGGTGC ATCTGAAGGT TCTGTGGATG CGGCCAATAT TTTAAAGCCA
GAACTTGCAC GTGGAGAATT AAGATGCATA GGTGCAACAA CAGTGGAAGA ATATAGAAAG
TATATTGAAA AAGATAAGGC ATTGGAACGC AGATTTCAAC CAATATATGT GAATGAACCA
TCAATAGACG AAACAATAGA AGTATTAAAG GGATTAAAAG AAAAATTTGA AGAATACCAT
GGTGTAAAGA TAGAAGATGA AGCAATTGAA GCTTCTGCAA AACTTTCCGC AAGGTATATC
CCAGATAGAT TTCTTCCTGA CAAAGCAGTA GATTTAATAG ATGAATCTGC TTCGAGAATA
AAAATATTGG GCGCTGATAA AGTAACAAAA GAAGATGTAG CCAAAACTGT TGAAATATGG
ACGGGTATTC CAATCGGTAG AATTATGGAG GGAGAAAAGG AAAAACTGAA AAATCTTGAA
AAGTTGATTC ATGAAAGATT TGTAGATCAA GAAGAAGCGG TAAAAGTTGT TGCAAGTGCT
ATTAGAATGT CAAGAACAGG TTTAAAAAGT GTAGAAAAAC CATCAGGAAT CTTTCTGTTT
TTAGGACCTA CGGGAGTTGG GAAGACAGAA CTTGCTAAAA GAATTTCAGA TATATTATTT
GGTTCTATGC AAAGTTTAAT ACGACTTGAT ATGAGCGAAT ATATGGAAAA ACATTCTGTT
TCAAGGCTTA TAGGTGCACC TCCTGGATAT GTAGGGTATG AAGAAGGTGG ACAACTTACA
GAAGCGGTAA GAAGAAGACC GTACAGTGTT GTGTTGTTAG ATGAGATTGA GAAGGCAAGC
TCAGAAATTT TTAACGTATT GTTGCAAGTG TTTGACTATG GAAAGTTAAC AAGTGGAAAA
GGAAATACAG TTGATTTTAG GAATACAATA ATAATAATGA CTAGTAATCT TGCAAGTTCA
GAAATTTTAA AAGCAATAGA TGAAGAAAGT GAAGATAAGA TCTCACAATA CGTTGAAAAA
GTTTTAAAAG AAAAGCTGAA TCCTGAGTTT TTAAACAGAT TGGATGCTGT TGTTATATTT
AAACCTTTAA AGAAAGAATA TGTAAAGAAA ATAGTTGACA TATATTTAAA GGAATTGAAC
GAGCGATTGG AAAACATTAC AGTTGAACTA GACGAGAACG TAAAAGATTA TTTGGCGGAT
TTAGGATATG TGCCATCTAT GGGTGCAAGA CCTTTAAGAA GATTATTTGA AAATACAATA
GAATTTACAT TGTCAAATTT AATTATAGAC GAGAAGATAA AAGAAGGTCA AAAAATAATC
TTTAAAAGAA GTGACTCTGG AATAATTTAT GATATAATAT GA
|
|---|
| Protein sequence | MFDMNEYTEN VQRVLMAVTD VLTRYKQNQM SSEHILLAIL EDERNAAKDI LKHLKVEVFE
LKKEIEAFIS RYGVKANAPA GQIFITPEAR HILEEARKEA KRMGDEKIGT DHILLAMTII
PESMTYRILS RYGVSQDRIY QAIKEIRTSG ATSEEENIDV LTKFTEDLTE LARTNRLLPV
VGREKEILRI MEILGRRLKN NPVVIGDPGV GKTAIVEGLA QRIVERKVPE FLKNKRILKL
DLARVIAGTK FRGEFEERLK KIVDIVKRTP NIVLFIDEIH MVVGAGASEG SVDAANILKP
ELARGELRCI GATTVEEYRK YIEKDKALER RFQPIYVNEP SIDETIEVLK GLKEKFEEYH
GVKIEDEAIE ASAKLSARYI PDRFLPDKAV DLIDESASRI KILGADKVTK EDVAKTVEIW
TGIPIGRIME GEKEKLKNLE KLIHERFVDQ EEAVKVVASA IRMSRTGLKS VEKPSGIFLF
LGPTGVGKTE LAKRISDILF GSMQSLIRLD MSEYMEKHSV SRLIGAPPGY VGYEEGGQLT
EAVRRRPYSV VLLDEIEKAS SEIFNVLLQV FDYGKLTSGK GNTVDFRNTI IIMTSNLASS
EILKAIDEES EDKISQYVEK VLKEKLNPEF LNRLDAVVIF KPLKKEYVKK IVDIYLKELN
ERLENITVEL DENVKDYLAD LGYVPSMGAR PLRRLFENTI EFTLSNLIID EKIKEGQKII
FKRSDSGIIY DII
|
|---|
| |