Gene Tmel_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0573 
Symbol 
ID5296909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp606415 
End bp607839 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content32% 
IMG OID640768835 
Productphosphomannomutase 
Protein accessionYP_001305825 
Protein GI150020471 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.660588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATATTAT TCGGCACAGG TGGAATAAGA GGTATTATGA AAGAAGGTGA ATTTGACGAA 
AAGACAGTTA TGGTAGCTAG TAAAGGCGTT TCAAACTATA TGAAGGATAA CAATTTAAAA
AGTATGGTTA TTGCATATGA TACAAGGAAC AACTCTCAAA AATTTGCAGA AATTTCAGCT
AGTGTGTTTG CCGCAGATGG ACATAAAGTT TATATATTTC CCGAACCCGT TCCAACACCT
GCTTTATCTT TTGCAGTAAG AGAGTTAAAA TGTGATATGG GAATAGTTAT CACGGCAAGT
CACAATCCAC CTGAATATAA CGGTTATAAG GTATATACAT CAGACGGTGT ACAAGCTGTA
CCTAAGTTAA CAGATATCTT AGCTAAATAT GTTGAAAGAG CTTGGAATAC CCCTATTGAA
CTTTCTAAAA ATTTCAACTA TTTAGAAAAA AAAATTCTCA ATAATTATGT TGATAAAGTA
GCAAAACTTA TTTCTACAAA CTTAAGTGGC CTAAAGATAG TATATACTCC CCTTCATGGC
ACAGGATTAA AACCAGTTGT ATCCGTATTA AAAAACCTTG GTGCAGAATT AATCCTTGTT
TCTGAACAAG CGTTTTTTGA CGGAAACTTT CCAACTGTAA AAAGTCCTAA TCCAGAAGAT
GATGAAGCAT TAGTTTTGCT AAAGGAATAC ATGGAAAAAT TTGAAGCAGA TTTAGGAATT
GCAACTGATC CAGATTGTGA TAGAGTAGGT GTAATTTGGA AGGGAAAAAG ATTAACAGGG
AATCAGGTAG GAGTACTAAT TACAGACTAT TTACTTGAAA ATGCAACTGA AAATGATATG
ATTATCAAAA CAATCGTCAC TACAGACATG GTAAAACCCA TGTGCAAAGA AAAAAATGTA
AAACTTTTTG AAACTCCTAC GGGATTTAAG TTTATTGGTC ATCTTGCAGA AAATAGCAAT
CACAATTTCT TATTCGGCTT TGAAGAAAGT TGTGGCTATC TAACGGGAAA TCTTTCAAGG
GATAAAGACG GTGCAGTTGG GGCGGCATTA ATTGCGGCAG TTTCCAAAAA ATTTGACTTA
ATTGAAAGAT TAAATTCTCT GTATGAAAAG TATGGGTATT ATATGGAAAA ACTTTTAACC
TATAAATTCA AAAACGCCGA AATTGCTAAA AATATTTATA AAAAGCTAAA AACAATAAAC
TTTAGAGAAA AGATAATAGA TTATTCAAAA GGATATGAAA ATATCGAACC AAACGAAACA
ATTGCCATTA TTTTTGAGGA AGGAAAGATC TTTATAAGGC CCTCTGGCAC AGAACCCAAA
TTAAAAGCTT ATGTTATGAC AGTCTCAGAT TCTGAAGAAA CGTCATCAAA AAATTTGGAA
ATACTTGTAA ATAAATTTAA CGATATACTA GACAACTTAA AATAA
 
Protein sequence
MILFGTGGIR GIMKEGEFDE KTVMVASKGV SNYMKDNNLK SMVIAYDTRN NSQKFAEISA 
SVFAADGHKV YIFPEPVPTP ALSFAVRELK CDMGIVITAS HNPPEYNGYK VYTSDGVQAV
PKLTDILAKY VERAWNTPIE LSKNFNYLEK KILNNYVDKV AKLISTNLSG LKIVYTPLHG
TGLKPVVSVL KNLGAELILV SEQAFFDGNF PTVKSPNPED DEALVLLKEY MEKFEADLGI
ATDPDCDRVG VIWKGKRLTG NQVGVLITDY LLENATENDM IIKTIVTTDM VKPMCKEKNV
KLFETPTGFK FIGHLAENSN HNFLFGFEES CGYLTGNLSR DKDGAVGAAL IAAVSKKFDL
IERLNSLYEK YGYYMEKLLT YKFKNAEIAK NIYKKLKTIN FREKIIDYSK GYENIEPNET
IAIIFEEGKI FIRPSGTEPK LKAYVMTVSD SEETSSKNLE ILVNKFNDIL DNLK