Gene Tmel_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0566 
Symbol 
ID5297274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp600586 
End bp601356 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content30% 
IMG OID640768828 
Productornithine carbamoyltransferase 
Protein accessionYP_001305818 
Protein GI150020464 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000138704 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAG GTAGTTTTTC AAAAATCATA ACGATATTTG TAATTATATT TTTTTACATA 
CCAATATTCA TTGTTGTGTT GTTTTCATTT AACAATTCAA AATCTCCCGT TTGGGTAGGT
TTTAGTTTTC ATTGGTATAA AGAATTGTTT TTCAATTCAT TTGATATTTG GAATGCATTT
TTTAACTCCA TAATTGTGGC GGTTTCTTCC AGTGTTATTG CTACCGTACT TGGTACTCTT
GCCGCAATAG GTTTATATTT GGAGAGGTTT AAGTACAAAA AATATATTTG GATTATTTCG
TATTTACCGT TAATAATACC GGATATAATC ATTGGTATTT CATTACTGAT TTTTTTTGTC
ATGATAAAAA CAAAATTGAG TCTTTTTACA ATATTCATAG CGCATACAAC TTTTTCTTTG
CCATATGCTA TGATGATAGT TTTTTCAAGG TTACAGGATT TTGATAAGAG TATAATAGAT
GCATCATATG ATCTTGGCGC ATCAAAGCTC GAAACATTAT TAAGGGTAAT AGTCCCAGCA
AGCTTTCCTG GTATTCTTGC GGCATTTTTT ATGTCATTAA CACTTTCAAT TGATGATTTT
GTCATAACAT TTTTTGTTGC AGGTCCTGGT TCAACTACTT TACCGTTGAA AATTTATTCA
ATGATTAGGT TTGGAATAAC TCCAACAATA AATGCTATTT CCACAATTAT GCTTGTTGGG
ACAATTGGTA TAAGCTTTTT AATGAGAAAA CAATTGAGAT ATATCTTTTA G
 
Protein sequence
MKPGSFSKII TIFVIIFFYI PIFIVVLFSF NNSKSPVWVG FSFHWYKELF FNSFDIWNAF 
FNSIIVAVSS SVIATVLGTL AAIGLYLERF KYKKYIWIIS YLPLIIPDII IGISLLIFFV
MIKTKLSLFT IFIAHTTFSL PYAMMIVFSR LQDFDKSIID ASYDLGASKL ETLLRVIVPA
SFPGILAAFF MSLTLSIDDF VITFFVAGPG STTLPLKIYS MIRFGITPTI NAISTIMLVG
TIGISFLMRK QLRYIF