Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0566 |
Symbol | |
ID | 5297274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 600586 |
End bp | 601356 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640768828 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_001305818 |
Protein GI | 150020464 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000138704 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAG GTAGTTTTTC AAAAATCATA ACGATATTTG TAATTATATT TTTTTACATA CCAATATTCA TTGTTGTGTT GTTTTCATTT AACAATTCAA AATCTCCCGT TTGGGTAGGT TTTAGTTTTC ATTGGTATAA AGAATTGTTT TTCAATTCAT TTGATATTTG GAATGCATTT TTTAACTCCA TAATTGTGGC GGTTTCTTCC AGTGTTATTG CTACCGTACT TGGTACTCTT GCCGCAATAG GTTTATATTT GGAGAGGTTT AAGTACAAAA AATATATTTG GATTATTTCG TATTTACCGT TAATAATACC GGATATAATC ATTGGTATTT CATTACTGAT TTTTTTTGTC ATGATAAAAA CAAAATTGAG TCTTTTTACA ATATTCATAG CGCATACAAC TTTTTCTTTG CCATATGCTA TGATGATAGT TTTTTCAAGG TTACAGGATT TTGATAAGAG TATAATAGAT GCATCATATG ATCTTGGCGC ATCAAAGCTC GAAACATTAT TAAGGGTAAT AGTCCCAGCA AGCTTTCCTG GTATTCTTGC GGCATTTTTT ATGTCATTAA CACTTTCAAT TGATGATTTT GTCATAACAT TTTTTGTTGC AGGTCCTGGT TCAACTACTT TACCGTTGAA AATTTATTCA ATGATTAGGT TTGGAATAAC TCCAACAATA AATGCTATTT CCACAATTAT GCTTGTTGGG ACAATTGGTA TAAGCTTTTT AATGAGAAAA CAATTGAGAT ATATCTTTTA G
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Protein sequence | MKPGSFSKII TIFVIIFFYI PIFIVVLFSF NNSKSPVWVG FSFHWYKELF FNSFDIWNAF FNSIIVAVSS SVIATVLGTL AAIGLYLERF KYKKYIWIIS YLPLIIPDII IGISLLIFFV MIKTKLSLFT IFIAHTTFSL PYAMMIVFSR LQDFDKSIID ASYDLGASKL ETLLRVIVPA SFPGILAAFF MSLTLSIDDF VITFFVAGPG STTLPLKIYS MIRFGITPTI NAISTIMLVG TIGISFLMRK QLRYIF
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