Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0563 |
Symbol | |
ID | 5297771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 596600 |
End bp | 598033 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640768825 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001305815 |
Protein GI | 150020461 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00974378 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAA AACACTGGAC ACAGTTAATA ATAGGATTGT TGTTTTTTGT GTTTTTGTTT TTCTCCAAAA CTCTTGCTTT TGGATTAGTT TTGCCCTTGT TTGCAATTGT GACAACTATA TTTAATACGA AAAAGGTTTA TCATTATATT TTTCTTTTTA TATCTCTTTT ACTTTATTTT TCTGCGTTTT TTGGGTTTAA ATACCTATTT GTTTTTAGTC CAAGATTTAA CTATTTACTT TCTATTGTTT TGTACTTATT TTCACTACCA CTTCCTGGAT TGTTTAAATT TGTAAGAAAC AGGATATATC AAATGTTAAT TTTACTTGTG ATATATGTAA CTGTTGTGTT TTTTATATTC TTAGCAATGC CAGGAGATTA TACTTCAAAG TTTCTTGACC CGAAAATTAT GAAACAACCG GAAATGATGG AGAGAATAAA AAAACTGTTT GGTGTAGGTG ATCCGTGGTA TGTAAAATAC GCAAAACATA TGCGAAATTT CTTTAATTTG GAACTTGGAA TATCTTTTTC GGAATATCCC AAACGAGTGG AAGAAATAAT TGCAGAAAGG CTTCCAAGAA CTGTATTTTT GTTTTTAATG ACCACACTTT CTTCGTATGT TTTGGGATAT AACCTTGGAA AAAGAATTGC TTGGAAACGT GGAGGCATTT CAGATAAAAT TGCCACATTT GTTGGAATAG TCTTTTGGAC TATATTTACT CCGTTTTTTA TGCTTATTAT GATTTGGCTT TTTGGTGTTG TGTTGAAAAT ATTCCCAATA AGCGGTTTTA TAGAACCATC TAAATGGTTG AACGTTAAAT TCTCTACTCA AGATGTATTT ATAAGGCTTT TGTTAAGTGC GTTTTTACTA GTTGTTTTCT GGGTAGTAGG GTTAATAGTT GCAGCATTTA TGAAAACAAA AAAGGCTAAA TCAATATCTA TGTTAAGCAT TACTTTTTTT GGTATTGCTA TTGTAATTCT TTATTGGATA TTTAATGGAT ATGGGTATTA TGCATTAGAT ATAGTGTATC ATGTTGTTCT TCCAGTATTA TCATTAACAG TTCTTGGTTT TGCGGGAAGT ATGTTGGTTA TGAGAGATAC TATGCTTGAG ATAATAAAAG AAGATTATAT TACAACAGCA AAAGCTAAAG GACTTCCCGA TAAAGTTGTG AGAGACAAAC ATGCGGCAAG AACGGCGTTA TTACCGTTAG TTACTAGTTT TGTTTTATCC CTTGCAACTA CTGTTAGTGG TGGTGTTATT ACAGAGACTA TGTTTTCTTG GAAAGGTATG GGACTTACTT TATTAAATGC TACACTTGTT CAAGATACAC CTCTTGCAAT GGGATGTTTA ACTTTTACCG GTGTGTTTAT TCTTGTGGCT CATTTGGTAG CTGATATTCT ATATGCAATC CTTGATCCTA GAATTAGATA TTGA
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Protein sequence | MNTKHWTQLI IGLLFFVFLF FSKTLAFGLV LPLFAIVTTI FNTKKVYHYI FLFISLLLYF SAFFGFKYLF VFSPRFNYLL SIVLYLFSLP LPGLFKFVRN RIYQMLILLV IYVTVVFFIF LAMPGDYTSK FLDPKIMKQP EMMERIKKLF GVGDPWYVKY AKHMRNFFNL ELGISFSEYP KRVEEIIAER LPRTVFLFLM TTLSSYVLGY NLGKRIAWKR GGISDKIATF VGIVFWTIFT PFFMLIMIWL FGVVLKIFPI SGFIEPSKWL NVKFSTQDVF IRLLLSAFLL VVFWVVGLIV AAFMKTKKAK SISMLSITFF GIAIVILYWI FNGYGYYALD IVYHVVLPVL SLTVLGFAGS MLVMRDTMLE IIKEDYITTA KAKGLPDKVV RDKHAARTAL LPLVTSFVLS LATTVSGGVI TETMFSWKGM GLTLLNATLV QDTPLAMGCL TFTGVFILVA HLVADILYAI LDPRIRY
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