Gene Tmel_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0546 
Symbol 
ID5296560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp580751 
End bp581998 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content31% 
IMG OID640768807 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001305798 
Protein GI150020444 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT ATCTCTTATT TCTAATAATG CTAATTTTCT CATACTCTAT TTTTTCTGCT 
CATTACGTAG AAGTTGAAAA CGTAACATCC ACCAATGTTA CTTTAAGAGT AACACCATAT
TATGATGCAA TAGTAAATCC AAAGGTATAC ATATATGGTC CTACAGGATT TGTGAGAGCA
AAAAATATCA AAGATGATTT GTACGAATTT GAGGATGGAT TGTATAAATG GGTAATTCCC
ATAATCTTTG GGAAAAACAA ATTTGGACAA ACAGTTACAG GAGTACTACC TCATCCCATT
GTTGATATTT ATCAATATAG AAAAAACATA AACATTAAAG TCATTACAGA CCCAGAAAAT
CTATCTTTAA CAGTGAAAGT TAACACGGAT TATGAAGTTA TTTCAGGGGA AATTGATAAA
AACAGGATGA TTTTAATAAA AACAGATGAA GGCTACATTC TATACACAAA CAAACAAAGA
AAGAATTGTC AAAACACTTT AAAGATAAAA GTTAAGGTTA GCAAGGAAAA GATAAAAGAA
ATATCTTTCA ATTTATTCAC TTTAAATGGC TTTACAACAT ACCTTAGGGG AGACTTTACA
CCATATGTAG TGGAAAAAAT AACCACTCAT GTGGTAAAGA AAGGAGAAAC ACTTTGGGAA
ATTGCAAAAA AGTATAAAGT TAGAACAGCA GATTTACAAA TTATAAACAA TTTAGATGAA
CCTGACAAAA TATACGCCGG TATGAAACTG GATATTGGAA CTGTGCAATT TACAGAAGGA
TTAACTTCGG TTGTAGTTAA CCTTGCAACA TCTAGACTTG CCGTATATTA TGCAAAAAAA
TTAGTAAAGG TGTTTCCCGT TGCAATTGGT AGAAGTGATT CAATGCCCCC TGGAATCTAC
TGGATTCTTG ATAAACAAAT AGATCCTGCA CTTTACTGGT TCGGTGAATA CATTCCTCCT
CGTTCCCCCA TAAATGGGCT TGGTACAAGA TTTTTACAAC TTTCAAATCC AACATACGGT
ATCCATGGAA CTACAAAACC ATGGGAAATT GGAAGAAGAA TCTCTCATGG TTGTGTAAGA
ATGTTTAATA AAGATGTTGA AGTCTTAGAT GCATTTGTAA ATTTAGGAAG TCCTGTTTTT
GTAATAAAAA GTTTTGAAAG TTTTCCTGAA AAACTTTCAG ATATTCCTGA ATTTAAAGAA
TTTAAATCTC AGACTGAACA AATAAAAGAA AAAATTAAGG AGGGATAA
 
Protein sequence
MKKYLLFLIM LIFSYSIFSA HYVEVENVTS TNVTLRVTPY YDAIVNPKVY IYGPTGFVRA 
KNIKDDLYEF EDGLYKWVIP IIFGKNKFGQ TVTGVLPHPI VDIYQYRKNI NIKVITDPEN
LSLTVKVNTD YEVISGEIDK NRMILIKTDE GYILYTNKQR KNCQNTLKIK VKVSKEKIKE
ISFNLFTLNG FTTYLRGDFT PYVVEKITTH VVKKGETLWE IAKKYKVRTA DLQIINNLDE
PDKIYAGMKL DIGTVQFTEG LTSVVVNLAT SRLAVYYAKK LVKVFPVAIG RSDSMPPGIY
WILDKQIDPA LYWFGEYIPP RSPINGLGTR FLQLSNPTYG IHGTTKPWEI GRRISHGCVR
MFNKDVEVLD AFVNLGSPVF VIKSFESFPE KLSDIPEFKE FKSQTEQIKE KIKEG