Gene Tmel_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0539 
Symbol 
ID5297314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp574699 
End bp575862 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content39% 
IMG OID640768800 
Productflagellin domain-containing protein 
Protein accessionYP_001305791 
Protein GI150020437 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATAA ATCATAACAT AAGTGCATTA AATGCGTGGA GAAGTATAGG ACAAACAAAC 
ATGTCCATGT CAAAGACATT AGAAAGACTT TCTTCAGGTC TTAGGATTAA TAGAGCAGGA
GACGATGCAG CGGGTCTTGC AATAAGTGAA AAGATGAGAG GACAAATTAA GGGTATTAAC
ATGGCAATAA AGAACTCACA AGATGCTATT TCATTGATTC AAACAGCAGA AGGGGCGTTA
ACAGAAGTAC ATTCTATTTT ACAAAGAATG AGAGAATTAG CAGTTCAAGC ATCCTCAGAC
ACAAATACAG ATGTTGATAG GAATCAAATT CAAGCAGAAC TTGACCAATT AAGAGAAGAA
ATTGACAGAA TTGCAAGAAC AACAGAATTT AATACCAAAA AATTGCTTGA TGGTAAACTC
GAAAGCTTCA GGGCAGATGT GGATGCAAAG GTAGTTACTG GTGGAAATAT TAATCTTCAA
CTTGGAGATG TAAGTTCTGC AGCTACAGAA GGGACATATA TAGTAGAAGT TGGTCAATTG
AATGGTTCTG AAACTTCAGC ACTTGATGTA AAGATTACGT TGATAACTGC TGGAGGAACA
TCTTCGACAG TTGTCACCTT GGGTGCAAAT AGTGCATCAT TAGGGAATAT TACATTTACC
TGGGATTCAT CTGTATTCAG CCTTTCTGAT TTTGGAGGGG CATTACCAAG TGGAGAAGTA
GTAGATAGTG CTGTTGTTAG GGTTGAAGCG GTAAACACAG CGGCAAATCA ATTGATATTC
CAAATAGGTT CAAACGAAGG ACATAATATG CTTACAGGAA TAGATGATAT GAGTGCAGGG
GCATTAGGAA TAACAACAAC ATCACTTGAT GTAACGACAC AAGATGCGGC AGAAAAGGCA
ATAATGGTAG TAGACGCAGC GATTCACAAA GTAAGTTCAC AAAGGGCAGC ACTTGGTGCG
GTACAAAACA GGTTGGAACA CACAATAGCG AACTTAGGAG TAGCGGCAGA GAACTTGACA
GCAGCAGAAA GCCGTGTAAG AGATGCAGAC ATGGCAAAAG AGATGATGGA GTTTACAAAG
CAGCAAATAC TCTTACAAAG CAGTATGGGG ATGCTTGCAC AGGCCAATGC ACAACCACAA
AATGTATTAC AACTCTTGAG ATAA
 
Protein sequence
MRINHNISAL NAWRSIGQTN MSMSKTLERL SSGLRINRAG DDAAGLAISE KMRGQIKGIN 
MAIKNSQDAI SLIQTAEGAL TEVHSILQRM RELAVQASSD TNTDVDRNQI QAELDQLREE
IDRIARTTEF NTKKLLDGKL ESFRADVDAK VVTGGNINLQ LGDVSSAATE GTYIVEVGQL
NGSETSALDV KITLITAGGT SSTVVTLGAN SASLGNITFT WDSSVFSLSD FGGALPSGEV
VDSAVVRVEA VNTAANQLIF QIGSNEGHNM LTGIDDMSAG ALGITTTSLD VTTQDAAEKA
IMVVDAAIHK VSSQRAALGA VQNRLEHTIA NLGVAAENLT AAESRVRDAD MAKEMMEFTK
QQILLQSSMG MLAQANAQPQ NVLQLLR