| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0521 |
|---|
| Symbol | |
|---|
| ID | 5298401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 560569 |
|---|
| End bp | 560940 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640768782 |
|---|
| Product | putative endoribonuclease L-PSP |
|---|
| Protein accession | YP_001305773 |
|---|
| Protein GI | 150020419 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.170713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTAA TTAATCCAAA AAATGGCCCA AAGGCTATAG GTCCATATTC CATAGCCGTT
AAAACGGGAA ATCTGGTATT TGTATCTGGA CAACTTCCAA TAACAGATTC TGGTGAATTA
ATAAAAGGAA ACATAAAAAA AGAAACAGAG ATAATTATGA AAAACATTGA ATTAATTTTA
AAAGAAGCGG GTAGCTCTAT TGAAAAAATT GTAAAGGTAA ATGTTTATAT GAAAGACATC
TCAAAATTTT CTGAATTTAA CGAAATTTAC GAAAAACTAC TCAACGGTCA TAAACCTGCA
AGGGCTGTTG TAGAAGTTTC AAAACTTCCA AAGGATTCTG ATATTGAAAT AGAAGCAGTA
GCGGAGGTAT AA
|
|---|
| Protein sequence | MQLINPKNGP KAIGPYSIAV KTGNLVFVSG QLPITDSGEL IKGNIKKETE IIMKNIELIL
KEAGSSIEKI VKVNVYMKDI SKFSEFNEIY EKLLNGHKPA RAVVEVSKLP KDSDIEIEAV
AEV
|
|---|
| |