Gene Tmel_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0498 
Symbol 
ID5298243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp525124 
End bp526323 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content28% 
IMG OID640768759 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001305750 
Protein GI150020396 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AAATAGTTCT TGTTTTAATT TGTTTAGCTA CATTTTTAGT AATTCTTTTT 
TATTTTTGCT TTTGGAAAGA GCAGATAGAT GAAAAGGTAA CGGCATATAC AAAGTCTTTA
GAATATCCTC TTTGGTTATT GGATGAATCA GGAATCGAAC AAATATTAAA TGTGATAATA
GAGGATAAAG AAATTTTATC TGTGAAGATA TATAACTTTA ACGGAAACCT TCTGCTTGAA
AAGAACGATG GAAATTTTAT TTCATTTGAC TATTCTATTC CTATATTTTT TGAAAGTGTA
TTTCTGGGAA ATGTTGTGTA TGAAATTTCA TATATAAGGC TTTTATTAAC GATTATTTAT
ATTGGTTCAA TTTCTCTTAT GTTTTACATC ATAGTCCTGC TTTTATTAAA GAATTTGGCG
ACAAATAAGA AGCTTATGGA TATAAACGAA GAACTTTTTG AAACAAACGA AGAGTTAGAA
GAAAATTTAA AAGAACTTGA AAGAACGCAA GAATCTCTCA TTACATCCGA AAAACTTGCG
GCAATTGGTA AATTAATGGT AAGTATAGCG CATGATATGA ATACTCCAAT TGGAATTATA
TATACAGCTG CAACAGAACT GGAAAATAAG CTAGATGATG ATAATAAAGA ATTGGTGAAT
ATAATAATAA AGAATGCTCA AAAGATATCT CAACTTATAA AAAGTCTGAA AAAGACAACT
TTTTATGAGA TTTCAAATAA CAAGTCATAT ATTAATATAA AGGAATTAGT TGAGGATATA
ATTACTACAC TTTCACCAAA GTTAAAAGAG AAAAATATAA AAGCGGTGCT AGATATAGAT
GATGTTGAAA TATACTCAAA TCCTGGGGCA ATTTCCCAAA TTATAATGAA CATAGTAAGT
AATGCAGTAG TACATGCTTT TGATAAATCT GATAATAATA TATTAACTAT TTTAGCTTGC
AGAAAGTCTA AAAACTTGGA GATAATAATA AAGGATAATG GAAAGGGAAT TGATGAGAAA
TTGCAAAGAA AAATATTTGA ACCATTTTTT TCAACAAAAG GAGTTGGTAG TGGTTTAGGA
CTAAGTATAG TCCATCATCT TGTGACTAAA GTATTAAATG GTGCTATATT TTTGGAAAGT
AAAAAAGATG AAGGGACAAC TTTTAAAATT ATTATACCAA TAGAGGTGGA AGATGAATAA
 
Protein sequence
MNKKIVLVLI CLATFLVILF YFCFWKEQID EKVTAYTKSL EYPLWLLDES GIEQILNVII 
EDKEILSVKI YNFNGNLLLE KNDGNFISFD YSIPIFFESV FLGNVVYEIS YIRLLLTIIY
IGSISLMFYI IVLLLLKNLA TNKKLMDINE ELFETNEELE ENLKELERTQ ESLITSEKLA
AIGKLMVSIA HDMNTPIGII YTAATELENK LDDDNKELVN IIIKNAQKIS QLIKSLKKTT
FYEISNNKSY INIKELVEDI ITTLSPKLKE KNIKAVLDID DVEIYSNPGA ISQIIMNIVS
NAVVHAFDKS DNNILTILAC RKSKNLEIII KDNGKGIDEK LQRKIFEPFF STKGVGSGLG
LSIVHHLVTK VLNGAIFLES KKDEGTTFKI IIPIEVEDE