Gene Tmel_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0487 
Symbol 
ID5298165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp513051 
End bp513773 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content28% 
IMG OID640768748 
Productalpha/beta hydrolase fold 
Protein accessionYP_001305739 
Protein GI150020385 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAC AACTACATTA TGAAATTATT CCAGGAAATA AAAAAAACAT CTTATTCTTG 
CACGGTTGGG GTGCAAGCTT TTTGTATTAT AAACAAATTG CTAAAAAACT AGAATACACA
TCTATTCTTT TAGACTTACC GGGTTTTGGT AAAAGTCCTA TTCCAAAAAA GATAATGACA
AGCTTTGATT ATGCAAACGT TATCTCTCAA TTTGTTGAAT TTTTAAACTT AAAAGATGTT
GTAGTAGTTG GTCATTCGTT TGGTGGTAAA ATAGCTGCTA TTTTGGCATC AAAGAATCCA
GAATGGATGG ATAAATTGGT AATAATCTCT GCACCAGGCA TCAAAAGGAG GAATTTAAAA
TTAAAAACAA AAGTTGCAAT CTATAAAATA CTATTTAGAA TCTTTAGAAC ATTCGGATTT
AATGTAAACA GATTGAGAGA AAAATTTGGC TCTGAGGATT ACAAAAATTC TAAAGGTATA
ATGAGGGAAA TTTTAAAAGG TGTAGTTAGC GAAGATATTT CAGAGGAAAT AAAAAAAATA
AACAAAAATA CACTTATAAT TTGGGGAGAA TTTGATGATG CTGTTCCAAT TTATGTGGCA
AAAGAATATA AAAGGTTGAT AAAAAATTCT AAACTCATTA TATACGAAAA TGCTGGACAT
TTCCCATTTT TAGAAAATAT TGACAGATTT TTAAAAGATC TAAAAAATTT TGTAGGAGGT
TAA
 
Protein sequence
MIKQLHYEII PGNKKNILFL HGWGASFLYY KQIAKKLEYT SILLDLPGFG KSPIPKKIMT 
SFDYANVISQ FVEFLNLKDV VVVGHSFGGK IAAILASKNP EWMDKLVIIS APGIKRRNLK
LKTKVAIYKI LFRIFRTFGF NVNRLREKFG SEDYKNSKGI MREILKGVVS EDISEEIKKI
NKNTLIIWGE FDDAVPIYVA KEYKRLIKNS KLIIYENAGH FPFLENIDRF LKDLKNFVGG