Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0487 |
Symbol | |
ID | 5298165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 513051 |
End bp | 513773 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640768748 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001305739 |
Protein GI | 150020385 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAC AACTACATTA TGAAATTATT CCAGGAAATA AAAAAAACAT CTTATTCTTG CACGGTTGGG GTGCAAGCTT TTTGTATTAT AAACAAATTG CTAAAAAACT AGAATACACA TCTATTCTTT TAGACTTACC GGGTTTTGGT AAAAGTCCTA TTCCAAAAAA GATAATGACA AGCTTTGATT ATGCAAACGT TATCTCTCAA TTTGTTGAAT TTTTAAACTT AAAAGATGTT GTAGTAGTTG GTCATTCGTT TGGTGGTAAA ATAGCTGCTA TTTTGGCATC AAAGAATCCA GAATGGATGG ATAAATTGGT AATAATCTCT GCACCAGGCA TCAAAAGGAG GAATTTAAAA TTAAAAACAA AAGTTGCAAT CTATAAAATA CTATTTAGAA TCTTTAGAAC ATTCGGATTT AATGTAAACA GATTGAGAGA AAAATTTGGC TCTGAGGATT ACAAAAATTC TAAAGGTATA ATGAGGGAAA TTTTAAAAGG TGTAGTTAGC GAAGATATTT CAGAGGAAAT AAAAAAAATA AACAAAAATA CACTTATAAT TTGGGGAGAA TTTGATGATG CTGTTCCAAT TTATGTGGCA AAAGAATATA AAAGGTTGAT AAAAAATTCT AAACTCATTA TATACGAAAA TGCTGGACAT TTCCCATTTT TAGAAAATAT TGACAGATTT TTAAAAGATC TAAAAAATTT TGTAGGAGGT TAA
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Protein sequence | MIKQLHYEII PGNKKNILFL HGWGASFLYY KQIAKKLEYT SILLDLPGFG KSPIPKKIMT SFDYANVISQ FVEFLNLKDV VVVGHSFGGK IAAILASKNP EWMDKLVIIS APGIKRRNLK LKTKVAIYKI LFRIFRTFGF NVNRLREKFG SEDYKNSKGI MREILKGVVS EDISEEIKKI NKNTLIIWGE FDDAVPIYVA KEYKRLIKNS KLIIYENAGH FPFLENIDRF LKDLKNFVGG
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