| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0469 |
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| Symbol | |
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| ID | 5297439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 495894 |
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| End bp | 496544 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640768730 |
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| Product | ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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| Protein accession | YP_001305721 |
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| Protein GI | 150020367 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCAA TAACTGTTGT AATAGAGAAT CTACCTTTTT TGCTACTTGG GGCATGGGAT
ACTTTAAAGC TTACATTTTT TTCGGTGCTT ATAGGACTTG TTCTTGGAAC GTTTATTGGA
ATGGGCCGCC TTTCAAAAAT AAAAGCGATA AATATACCGT CAACTGTATA TGTGGAATTT
TTGCGTGGAA CACCGTTGTT GGTACAAATA TCAATAGTGT ATTTTGGACT TCCGCAACTT
GGTATACAAC TGGAAGCATA TCCTGCTGCA ATTGTTGCAC TTGGTTTGAA TAGTGGTGCC
TATATTGCAG AAATAGTAAG GGCAGGTATT CAATCTATTC CGAAAGGTCA ATACGAGGCA
GCAAGATCTC TTGGAATGAC ACATTTTCAA ACGATGAGGT ATATTATTTT ACCGCAGGCG
TTTAAAAATA TCTTACCTGC ACTTGGTAAT GAATTTATAA CTCTTACCAA AGATAGTTCA
CTTGCTTCAA TTATTGGTGT AACTGAATTA ATGAGAAGAG GGCAATTTGT TATTACTAGG
ACGTTTCAAA CATTTTCCAT ATACTTTGGT ATTGCTCTAA TATATTTTGT GATGACATTT
ACTATATCAA GATTAGTGAG ATTTGCGGAA AAAAGGATGG AGATATCATG A
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| Protein sequence | MEAITVVIEN LPFLLLGAWD TLKLTFFSVL IGLVLGTFIG MGRLSKIKAI NIPSTVYVEF
LRGTPLLVQI SIVYFGLPQL GIQLEAYPAA IVALGLNSGA YIAEIVRAGI QSIPKGQYEA
ARSLGMTHFQ TMRYIILPQA FKNILPALGN EFITLTKDSS LASIIGVTEL MRRGQFVITR
TFQTFSIYFG IALIYFVMTF TISRLVRFAE KRMEIS
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