Gene Tmel_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0439 
Symbol 
ID5297749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp461028 
End bp462155 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content32% 
IMG OID640768700 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_001305691 
Protein GI150020337 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00930818 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCGC TTTTCGATAT TACAAGACAA TACAAAATGA TAAAAGATGA AGTGCTTAAA 
GCAATAGATA GGGTTCTATC CAGTGGAAGG GTAATCTTAG GTCCTGAGGT TGAAAAATTA
GAAAGTAACA TAGCAAATCT TGTGGGAGTA AAATACGGTG TAGGTGTTGC AAATGGAAGT
GATGCTCTTG TAATTGCACT TAGAGCACTG GGAATAAAAA AAGGCAATAA AGTAATTACC
ACATCATATA CATTCTTTGC CACTGCATCT TCAATTGTAA GAAACAACGC AATTCCTATT
TTTGTAGACG TTGATAAAGA TACTTATAAC ATTGATTTAA ATCAAGTAGA AGATATATTA
AAAAAGGAAA AGATATTTGG ATTGATTCCT GTACACCTTT TTGGACAGAC CGTTGATTTA
GAGGGGTTAA ACTTTTTAAA AGAAAAATAC GGAATAAAGA TTTTAGAAGA TTGCGCACAA
TCAATTGGCT CTGAAGGAGT TGTTAAAGGA AAGATAAAAA AGAGTGGGAG CATAGGAGAT
GCCGCAATTT TTTCATTCTT TCCCACAAAA AATTTAGGCG CATATGGCGA TGGTGGATTA
ATAGTAACAA ATGACAAAAA AGTATACGAA AAATCTAAAA TGTTAAGAAC ACATGGTGCA
AAGAAAAAAT ATTACCATGA AGAAGTGGGA TACAATTCAA GATTGGACGA AATACATGCC
GCAATATTAA ATATAAAATT AAAATATCTT GACACGTGGA CAGAAAATAG AATAAACATT
GCAAAAAAAT ATGCAGAAGA GTTTAAAAAC AGAAAAATGC CATTAAAATA TCCTTATCCC
AAAGACAAAT TCCATGTATT CCATCAATAC GTTGTGGAAT TTGAAAAGGA AGACGATAGA
AACAAAGTAA GAACTTATTT ATCAGAAAAG GGTATAGGAA CAAGCATATA TTATCCTGTA
CCTCTTCATC TTCAAAAGTG TTTCAAAGAT TTTGGATACA AAAAAGGAAA TTTTCCAATT
TCTGAAAAAC TTTCAAAAAC AACTCTTGCA TTACCAATAT TCCCAGAACT TCGCTTTGAT
GAAGTTGAAA CAATAGTAAG TAAAATAGAA GAAGCTTTGA GGAGGTAG
 
Protein sequence
MIPLFDITRQ YKMIKDEVLK AIDRVLSSGR VILGPEVEKL ESNIANLVGV KYGVGVANGS 
DALVIALRAL GIKKGNKVIT TSYTFFATAS SIVRNNAIPI FVDVDKDTYN IDLNQVEDIL
KKEKIFGLIP VHLFGQTVDL EGLNFLKEKY GIKILEDCAQ SIGSEGVVKG KIKKSGSIGD
AAIFSFFPTK NLGAYGDGGL IVTNDKKVYE KSKMLRTHGA KKKYYHEEVG YNSRLDEIHA
AILNIKLKYL DTWTENRINI AKKYAEEFKN RKMPLKYPYP KDKFHVFHQY VVEFEKEDDR
NKVRTYLSEK GIGTSIYYPV PLHLQKCFKD FGYKKGNFPI SEKLSKTTLA LPIFPELRFD
EVETIVSKIE EALRR