Gene Tmel_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0401 
Symbol 
ID5297152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp418794 
End bp419495 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content33% 
IMG OID640768664 
Producthypothetical protein 
Protein accessionYP_001305655 
Protein GI150020301 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAG GGAAAATTAT AAGAGTTAAA GACATTGAGG TTACGGTTTA TAAGAAACGA 
ATTAAAAATC TCCATCTGAA TGTTCTACCA CCTGATGGAA AAGTGAGGGT TTCCGTTCCA
GAAGGTGTCT CGGATGAGGT AGTGAAGTTA CTGGTCATTA AAAAGTATCA TTGGATAAAA
AAACACATCA AGTCTTTCCA AGAGCAAGAA AGACAGACTA AAAGAGAATA TGTTTCGGGT
GAGAGCCATT ATTTTAAAGG AAGGAGATAT ATCCTGAGAA TAGAATTCGC TAAAAGACCA
AAAATAGAAG TAAAAAACAA AAAGTACATC TATTTTTATG TGCCAGCTCA TTATACGATT
CAACAACGGC AAAACTATTA CGAAAAATGG TTAAGAAAAG AGCTGAAAAA AGAGTTGGAG
ATTCTGGTAC CAAAATGGGA AAAAATAATT GGGGTGAAAA TAAACGAAAT AAGAATAAAA
AAAATGAAAA CTAAGTGGGG AAGCTGTAAC CCAGATGCTA AAAGATTATG GCTGAATTTA
GAACTCATAA AAAAACCAAC AGAGTACCTG GAATATGTGA TTGTTCACGA ACTTATACAC
TTATTGGAGA AAAAACACAA CGGACGATTT AAAGAATTAA TGAGCAAATA TTTGCCAAAA
TGGAAAATAT ACCGGAGGCA ATTAAACGAA TTTATCCTGT AG
 
Protein sequence
MEKGKIIRVK DIEVTVYKKR IKNLHLNVLP PDGKVRVSVP EGVSDEVVKL LVIKKYHWIK 
KHIKSFQEQE RQTKREYVSG ESHYFKGRRY ILRIEFAKRP KIEVKNKKYI YFYVPAHYTI
QQRQNYYEKW LRKELKKELE ILVPKWEKII GVKINEIRIK KMKTKWGSCN PDAKRLWLNL
ELIKKPTEYL EYVIVHELIH LLEKKHNGRF KELMSKYLPK WKIYRRQLNE FIL