| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0379 |
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| Symbol | |
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| ID | 5296701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 394490 |
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| End bp | 396397 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768641 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001305633 |
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| Protein GI | 150020279 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATT TGTTATTTTT TTTATTGGGT TTTTTCGTTA TAATACTTGG ATTATTTTAC
ATGTACGATA GGTTCACATC TAACTTACCG GAACCAGAAA CTTTGGTTCC ATCTAGTCTT
ATTATTGAAT TTTCCGATGG AACACCTTTT TATTTTCCAA GGGCATATTG GTATAACTTA
GAAGATTATC CAGAAAAACT TATAACTGCA CTCATAATTT CAGAAGATGA AGACTTTTTC
TCACATCCAG GAATTGATAT CCTAGGAATG ATAAGGGGCA TTTTTTATAC AGTTATAAGA
AAAAACACAC AAGGGGGAAG CACATTAACA CAACAACTTG TAAGAAGTCT TTATTTAACC
CAGGCAAGGA CTATTGAAAG AAAGATAAAG GAAATATTTA TATCTTTATA CCTTGAAAAA
ATAAGAACAA AAGAAGAAAT TTTAGAATTA TATTTAAATT CAGTATATAT GGGGAACGGA
ATTTATGGAT TTGGTACTGC TGCAAAATAT TATTTTGGTA AAGAACCAAA AAATTTGAAT
TTAGCGGAGA TAGCACTTTT GGTGAATACT GTAAAATCCC CGGAAAATTT TAATCCTCAA
GATTTAAAGG GAAGGTATAA AAGGGCAAGT GTTGTTTTAA AAAGGTTATT GGTTGAAAAT
TATATATCTA ACGAGGAATA CGAAAAATAC TCAAAACTTT TAAATAAAGT AAAGTCATAC
AACGTTTTTG AATCAAAATA TGATGAGGAA ATATTTTGGA GGATAATAGA TGAATTAAAA
GAAAAAGGAT TTACACTTGA TTTGCTCAGA AAAGGTTTTG TTGTAAAAAC CACTTTAAAT
AGAAAATATT ACAACTTATT AATTGAAAAT TTTAGTGAAA ATAATGCGGG AATAATTATA
AATTATAGAA CAGGTGAGAT ACTCGCAATG TACGGAAAAG GAGTGACAAA CGGTAGAAGG
CAAATAGGGT CATTGATAAA ACCTTTTTAC TATTATAAAG CAATTCTGGA CGGATTCAAT
TTAGATACAA AGTTATTTGA CCTTCCAATA AAAATTGGAG ATTGGACACC AAAAAATTTT
GAAAAAGACT ATTACGGTCA AACAAAATTG GAAGATGCAT TAATTCATTC TAGAAATATC
CCTTCTGTCA ACCTATACCT TATGTTAGGA GATGTAATGG TTAGAGATTT CTTGAAAAAT
GAGTTATACA TTAACGGATA CTATCCTCCG GATTTAACTT TGTCTTTGGG TACCATTGAA
ACTTCACACG AACAAATTGC AAAAGGTTTT TCAGGTATAT TAACGGGAAT AGTGGTAAAA
CCTTACATAG TAGATGAAGT AAGAAACAGT AAAGGGGTAG TTGTATACAA AGCAAAACCA
GAAATCTTAA ATATCATTAA ATCTTCAAAA AGATATCCTA TGGAGGCAAG TTATTTAATT
ATTGATTTAT TGAGAAAGGT AGTAAATTAT GGCACGGGAA TTAGGGCAGA TATTCCAGGT
AGAACTATTA TTGGAAAAAC AGGAACTGCA GAACAATTTG CTTGGTTCTT TGGTGCAGAT
GGAAAACTAA TGATGATTAT TTCACAGGAT GGAAGAGATT TACTAGGGGG AAGAGATGTA
GCACCAATTT TGAGAAAAAT TGCTTTAAAA ACTGATATGG GAAAAACACC TTTTTCCATT
TCATCTGTTT ATAGGAAACT AGAGGTTGTA AAGATCGATC CTTTAAGGTA CATTGATTAC
AAATATTTAA TTGATTTAAT TAAAGAAGGT AAATTTAGTT TAGAAGAATT GATAAAGATT
CTACGAACAT TTGATAGGGA GTATTTAATA GAATTTCTTT CATATATGAA TACAGTTTCT
CAAGAATTTA CAATAAGGTT ATGGAATATG CTTGGAGGTG GAAAGTAA
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| Protein sequence | MKNLLFFLLG FFVIILGLFY MYDRFTSNLP EPETLVPSSL IIEFSDGTPF YFPRAYWYNL
EDYPEKLITA LIISEDEDFF SHPGIDILGM IRGIFYTVIR KNTQGGSTLT QQLVRSLYLT
QARTIERKIK EIFISLYLEK IRTKEEILEL YLNSVYMGNG IYGFGTAAKY YFGKEPKNLN
LAEIALLVNT VKSPENFNPQ DLKGRYKRAS VVLKRLLVEN YISNEEYEKY SKLLNKVKSY
NVFESKYDEE IFWRIIDELK EKGFTLDLLR KGFVVKTTLN RKYYNLLIEN FSENNAGIII
NYRTGEILAM YGKGVTNGRR QIGSLIKPFY YYKAILDGFN LDTKLFDLPI KIGDWTPKNF
EKDYYGQTKL EDALIHSRNI PSVNLYLMLG DVMVRDFLKN ELYINGYYPP DLTLSLGTIE
TSHEQIAKGF SGILTGIVVK PYIVDEVRNS KGVVVYKAKP EILNIIKSSK RYPMEASYLI
IDLLRKVVNY GTGIRADIPG RTIIGKTGTA EQFAWFFGAD GKLMMIISQD GRDLLGGRDV
APILRKIALK TDMGKTPFSI SSVYRKLEVV KIDPLRYIDY KYLIDLIKEG KFSLEELIKI
LRTFDREYLI EFLSYMNTVS QEFTIRLWNM LGGGK
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