| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0361 |
|---|
| Symbol | |
|---|
| ID | 5298007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 373383 |
|---|
| End bp | 374831 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 640768622 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_001305615 |
|---|
| Protein GI | 150020261 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCATAA AAAAATCTAG TACTATATTA TTAGTTTCTA GGTTTGTAAA AACGTTAATA
GATATAATTT CTGTAATGAT TTTGTCAAGA TACTTAGAGA TTGCAGATTA TGGGATATAC
AGACAAATAG TAATATCCCA ACAATTGGTA GTTAGTGTAC TTACACTTGG AATTCCAAAT
GCCGCTTTGT ACTATCTATC TTCAAAAAAA GAGAAAGAAT ATTTGATAAA TTTGTATACA
ATGTTATTTT CAATATCTTT TCTAGTATTG TTAATATCAC CAATATTAAC AAACTTGTTT
TATTTGAATT TTAAAGTGAT TTTTTTTAGA AAAAATGAAC TAATTATAGG CCTGATATAT
AGTCTTAGTA TATTTTCTTC AGTAGCAGAA AATGTATTAG TTGCATTAAA TAAGATTAAA
AATGTTGCAG TTTATGCGTT AATACCTACA ACATTCTGGC TTGTAGGTTT ATTGGTATTA
TATACATCCA AATATACGGT ACAAAACATA TTAACATTGA TGATTTTGAG ATATCTTGTG
GGGATAATAC TGCTAGTAAT GTTTACATAT AAAGAAATAA ATTTTCGATT TTTAAATATA
AAAAAAATAA GAGATATCCT AGTGTTTGGA ATACCAATAG GACTGTCTTC GATGTTAGGA
ATATTGAATA AAAACGTAGA TAAACTAATA GTGGGATATT TTGTAAATAA TACAGATTTT
GCAGTATTTT CAAATGGAGC ATACGAAATA CCATTTTTGT CATTAATAAC TTCATCTTTA
TATACAGTAT TAATACCACA GATGGCAAAA TTAAATGAAA TAAAAGATAC AAAAAACATA
AAAAAACTTT GGTTACGCGC GGGAAACATA ATGATAACAA TAATGATTCC GCTAGCAAGT
ACGTTTATCT TTTTTTCAAA ACCATTTATA TTGTTTATGT TTTCAAATAA ATATTTAGAT
TCAGTTGAAT ATTTTAGAAT ATACCAAATA ATGTTGTATT TTAGAATATA CGTCTATGGT
TCAGTATTTG TAGCAACAAA AAATAGCAAA CTTTATTTAA CCAATGCACT TTATTCGCTA
GTTTTTAATT TTGTTTTGGA TATTTTATTA GTAATAAAAT TTGGTCCCTT AGGAGCAGTA
GCAGCAACGG TTATGACAAC TGTATTTTCA ATATTCTTAC AATTAAAATA TATAAAAGAC
ATATTAAAGA TAAAGTTTGT AGAAGTATTT CCATGGAAGA ATTGGATATT AGCAATAGCT
TTAACAATCT TAATCAACTC AGTTTTATAT ACAATATACC ATTTAATTTC TAATAACGTA
TATATGGGAC TTTTATTTAT GATGATGTCA TTTATTTTAT CATTTTATGT GTTATCAAAA
AAAGTTAATG GGGAGATTTT AGATTATTCC GTTTCAATCC TAAAGAAGAT GTTTAAAAAT
AAGGAGTGA
|
|---|
| Protein sequence | MSIKKSSTIL LVSRFVKTLI DIISVMILSR YLEIADYGIY RQIVISQQLV VSVLTLGIPN
AALYYLSSKK EKEYLINLYT MLFSISFLVL LISPILTNLF YLNFKVIFFR KNELIIGLIY
SLSIFSSVAE NVLVALNKIK NVAVYALIPT TFWLVGLLVL YTSKYTVQNI LTLMILRYLV
GIILLVMFTY KEINFRFLNI KKIRDILVFG IPIGLSSMLG ILNKNVDKLI VGYFVNNTDF
AVFSNGAYEI PFLSLITSSL YTVLIPQMAK LNEIKDTKNI KKLWLRAGNI MITIMIPLAS
TFIFFSKPFI LFMFSNKYLD SVEYFRIYQI MLYFRIYVYG SVFVATKNSK LYLTNALYSL
VFNFVLDILL VIKFGPLGAV AATVMTTVFS IFLQLKYIKD ILKIKFVEVF PWKNWILAIA
LTILINSVLY TIYHLISNNV YMGLLFMMMS FILSFYVLSK KVNGEILDYS VSILKKMFKN
KE
|
|---|
| |