| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0340 |
|---|
| Symbol | |
|---|
| ID | 5297982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 347870 |
|---|
| End bp | 348445 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640768597 |
|---|
| Product | pyruvate/ketoisovalerate oxidoreductase, gamma subunit |
|---|
| Protein accession | YP_001305595 |
|---|
| Protein GI | 150020241 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGCAA AGTATTTTGA AATAAGATGG CACGCAAGAG CCGGTCAAGG TGCAAAAAGT
GCTTCTCAAA TGCTTGCAGA AGCAGCTTTA GAAATGGGAA AATATGTTCA ATCATTTCCT
GAATATGGTG CAGAAAGAAC AGGGGCACCA ATGAAGGCAT TTAACCGTGT TTCAGATGAA
CCAATTTTGA TTCACAGTTC CGTTGACTAC CCTGACGTTG TTGTCATTAT AGATGACACA
ATGTTAGGAC AACCTGCTTT AACTGATGGA ACAGATGAAA ACACTGTATT TATAGTAAAT
ACAGTAAAAG ATGTAGAATA CGTCAGGGAA AAATTGGGTG TGAAAGGGAA GATTTGTACA
ATAGCCGCAA CAGATATCGC ACTTGAAGAG CTAAAAAGAG GAATTCCAAA TACAGTCATG
CTTGGTGCAA TAGCAAAAGT TACAGGAGTT ATTACCCTGG AAAGTGCCGA GCAAAGAATA
AGGAAAGCTT TTTCAAAGAA ATTCCCAGAA GAGTTAGTTG AAGCAAATGT AAGGGCATTG
CGCCGTGGAT TTGAGGAGGT GAAGTGCAAT GGCTGA
|
|---|
| Protein sequence | MPAKYFEIRW HARAGQGAKS ASQMLAEAAL EMGKYVQSFP EYGAERTGAP MKAFNRVSDE
PILIHSSVDY PDVVVIIDDT MLGQPALTDG TDENTVFIVN TVKDVEYVRE KLGVKGKICT
IAATDIALEE LKRGIPNTVM LGAIAKVTGV ITLESAEQRI RKAFSKKFPE ELVEANVRAL
RRGFEEVKCN G
|
|---|
| |