Gene Tmel_0334 details

Gene Information

• Locus tag: Tmel_0334
• ID: 5297741
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 340467
• End bp: 342461
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 640768590
• Product: hypothetical protein
• Protein accession: YP_001305589
• Protein GI: 150020235
• COG category: [S] Function unknown
• COG ID: [COG4254] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA TAATCTTCTT TTTCCTAACT TTATCCACTT TAATATTCTC AGAATTAACT 
ATAATCCCAG ATGCAACACA GATTTATATA GGTGAAGAGG TGGGAATAAA AATTTTATCA 
GATGAAAGGG TATACGTAGA ATTTAATTTA GGTGGCTTTG AAGATCCCGA AATCATCTTT 
GATGGAACAG AAAAAGAGTA TGTAAAATAT ATAGCTCCAC TAATTGAATC GAGCGATACC 
TTAGTCTTTA AAACTTCAAA AGAAGAGAAA AAAATTACGC TTTACTTTGT AAAAAAAGAA 
GAGAAAACAT TACCAAAAGC ATTTGCAAAG GTAAATGATT TCTTTGGAAA TGTCGCTATA 
AAAAAACAAG ATGTATGGGA ACCAATTACA ACTAACACAA TAATAGAAGA GGGCGATGAA 
ATACTTACAA TGTCGAATTC ATTTCTTGAA ATACTTTTTC CAGATGGAAG TATATCGAAA 
ATTATGGAAA ATTCACAAGT ATTTGTTGAA AAACTTAGAT ACAAAGAAAA AATTGATGTA 
GTATTAAATT TAAAAAAGGG AGAAAATTAC AACATAATAC AAAAATTTCT CGTTTCAGGT 
TCATCGTTTA AGGTTAAAAC CTCAAGTGTT ACCGCTGGAG TAAGAGGTAC AAGATTTTCC 
GTAATAAACA AAGATGGTAG CACAAATATC ATTACATTTG ATGGGGTGGT TTTTGCCTAT 
TTCAACAATG GCAAGATAAT ACCTGTAAAA CAAGGATTCT CTTTATCATC GTTTGAAAAA 
CCAACAAAAA ATACCATTCC AGAAAACAAA TTTGAAAAAC CAAAAATAAA AAAAGAAGAA 
AAAACTAAAA CTGAAGAAAA AGAAACAAAA GAAACAAAAT CACAAGAAAT TCCACCTATT 
TCTATAGAAC CGGTTAATAA AAATGGTATA GACTATATGA TATACTCAAT ATCGCCAGAA 
TTTAACCTTG GAATAATCAC ATTAGGTATT GGATTTACAG CATATTCAAC TGAGGTTGGA 
GGAACACTAT ACTATGGGCT ACCCTCTTCA AGCCCAAGCA CGAATATAAT TAATGCATTT 
ACAATTAATT CTGTGTCGTT ATCACTATTT GGTGCTACAT TAAGATATGG AAACATGTTT 
CCAGTATCAC TTGCCATGGG TTTTACCACA CGCGATTATT ATAATTATCC TGCAAAGGCA 
TTTGATATCG CATATGAAAA TGAGTTAATA TATCTATTTT TACACCTTCC ATATGAACTA 
TCTAAGATTT TTCCCTTTGA ATTCAATAGT TCTGATTCCG TGTTCTTAGG GGAGTTTGCA 
TTAAAATACA ATCTCCCATT AATTGGAACA TCCAAAATCG GTGTCTCTAT AACCTACGAT 
TTTGAAGCAA GTAATACGTA TGTTATAAAT GAAGCAACAC CTATTAATTC AGCATTTAGT 
CTATTTGTAA AAAAACAACT AATAGATAAT GTAGATTTGG GTATAGAACT TTCAATAGAA 
AATGGTGAAA AAATAGCTTA CGGACTTTTT TCAGGAATTT ACGGTAAATT GGGATTTGTA 
AACATCACAG GAGGGATCTA TTACCACCTA GATGGATTTA TTCCTTACTA TTTTAGTAGG 
AATTATTTAT ATTTAAAAAA CAACAAATCT CTTCCTTCCA TGTCTAATGA TAGTACATTT 
GGGTATCTTT TGGGATTTGA TTTTGAAACT CAATATGCCG CTGGTAGATT TTATCTGTAT 
GGATTTGATC CCAAATTAGA AGGAGAAGGA AGGGTAATAA TTCCATCATT CGGTGCGTTT 
AGTGGTCTTT TTGTAACCGC ATATTATTAT GATCCTACAC CATTTGTCAA CGGATTCTTA 
AGCTTAGATA CTACAACATA TATAAAAATT ACCTATCCAC TTGTAGGAGA ATCACTTACT 
GGTGGTATAA TATTAAGTTG GAATGGGTAT GAATGGGTAG AAAATGTAAT TTTTGGTGCA 
GAAATTTGGA GGTGA 

 

Protein sequence

MKKIIFFFLT LSTLIFSELT IIPDATQIYI GEEVGIKILS DERVYVEFNL GGFEDPEIIF 
DGTEKEYVKY IAPLIESSDT LVFKTSKEEK KITLYFVKKE EKTLPKAFAK VNDFFGNVAI 
KKQDVWEPIT TNTIIEEGDE ILTMSNSFLE ILFPDGSISK IMENSQVFVE KLRYKEKIDV 
VLNLKKGENY NIIQKFLVSG SSFKVKTSSV TAGVRGTRFS VINKDGSTNI ITFDGVVFAY 
FNNGKIIPVK QGFSLSSFEK PTKNTIPENK FEKPKIKKEE KTKTEEKETK ETKSQEIPPI 
SIEPVNKNGI DYMIYSISPE FNLGIITLGI GFTAYSTEVG GTLYYGLPSS SPSTNIINAF 
TINSVSLSLF GATLRYGNMF PVSLAMGFTT RDYYNYPAKA FDIAYENELI YLFLHLPYEL 
SKIFPFEFNS SDSVFLGEFA LKYNLPLIGT SKIGVSITYD FEASNTYVIN EATPINSAFS 
LFVKKQLIDN VDLGIELSIE NGEKIAYGLF SGIYGKLGFV NITGGIYYHL DGFIPYYFSR 
NYLYLKNNKS LPSMSNDSTF GYLLGFDFET QYAAGRFYLY GFDPKLEGEG RVIIPSFGAF 
SGLFVTAYYY DPTPFVNGFL SLDTTTYIKI TYPLVGESLT GGIILSWNGY EWVENVIFGA 
EIWR