Gene Tmel_0322 details

Gene Information

• Locus tag: Tmel_0322
• ID: 5297579
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 328909
• End bp: 330897
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640768580
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001305579
• Protein GI: 150020225
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAGGA ATATGTCCAT TAAATCTAAA CTGTGGTTAC TTATTATTTT AGCATCAGTT 
GTTCCTCTTG TGATTATTTC AACAGTAGCT ATAGTAAATT CATTCCAAGT TGGGAAAGAA 
CTTGGAATGG AATCATTAAA AGCCATTGCC AGGCAAGGTT CTTCAAACCT AGATAACTTT 
TTAAAAGGGT ATATAAACCT TGTTGATTTT CTTTCAACTG ATGCAAATGT AATGGGTGCT 
TATGAAAATA AATACGATGA AGTTACTTGG ATGATGAAAA CGTTTAAAAA TATAAAAGAA 
AAATATCCCG ATGCTCTTTG GATATATATG GGACTTTCCG ATAAAAAATT CTACATTTAT 
CCTGAAAGTG ATGACCTTCC ACCAGATTAT GATCCAACAG TACGACCATG GTACAAAGAT 
GCCGTTAAAA ACAAGGGAAA TGTGGTTATC ACTGAACCAT ATGCAGATGC ATCAACAGGT 
GATATAGTTA TAACAGTTGC AAAAGCTGTT GTAGTCAACG GTAAAATCAA CGGAGTTGTG 
GCAATAGACT TTAAAGCATC AGATCTTGCA AAAAAACTTT TATCAGCTAA ATATGGAAAA 
GACGGTTATT CATATCTTTT ATCAAGCGAT GGAAAAACAT TACTCCATTC TGACAACTCC 
AAAATTGGAA AAAGTGTGGC AAATTTTGAT TGGTTTAAAA AGATAAAAGA CAAACAAGAA 
GGTGCAATTG AATATGAATA TGAAGGCGTA AAGAAAGTAG TTGGATTTTC TAAAACGGAA 
AATGGATGGA TATTCGCATC TGTTGCACTT CAAAGTGAGG TTAACAAAAA AGCCATCGAG 
ATTATGATAG TACTTATTAT CATCTCATTA ATTGCTATTA CTATTGCATT TGTATTTGGT 
ACAATCACTG GAAGTTCCAT TGTAAAACCA ATAAACAAAC TCGTTGAAAT AATTGAAAAA 
GTAGGACAAG GCGATCTCTC AAATAGAGCA GTTATAACCT CAAAAGACGA AGTTGGACAT 
ATGGCAAATG AGCTAAACAA AGCACTTGAT AATCTTTCAA ATTTAATATC AGAAGTTAAC 
CAAAATTCCG TAAAACTAAA CAAAAATGCA GAAAAACTTT CAGCACTTTC AGAAGCACAG 
GAAGAAGAAG TTACAACACT TACCCAAAAC ATCGAAGAAA TAAATTACGA AATTCAAAAT 
GCTTCATCTG CAATTGAAGA AACAACAAGT GGTGTGGAAG AGGTTGCAGC AAGTGCACAA 
AATGTCTCTA AAACATCTCA AGATTTAACT GAAAAAGCAA CAGAAGTATC ACACGCAGCT 
AAAAATAGTG AAAAAGCAAT AGATACAATT AATAAAATCA TAAATAATAT CATGGATAAA 
TCCCTTTCTA TGTCAGAAAA GGTTGATTTA CTATCAGATA ATGCAAAAAA CATTGGAGAA 
ATTGTTGAAA CCATTTCCAG TATCGCAGAA CAAACAAACT TACTTGCACT CAATGCTGCA 
ATAGAAGCAG CAAGAGCAGG TGAGGCAGGA AAAGGTTTTG CCGTTGTTGC AGACGAAATT 
AGAAAATTGG CAGAGGAAAG TAAGATTGCA ACGGATAAAA TAACCTCAAT CTTAAAAAAC 
ATACAAAATG GTTCTGAAGC TGTGAGAAAA GAAACAGACG ACATGGTTGA AATTGTTACA 
AATGCAAGTA AAGAAAGTGA GAATGTAACA GTAAACCTCA GAGGTATACT AGCGCAAATT 
TCTGATATTT CAGGAATGAT TGAAAATCTA GCCGCAATAG CCCAAGAACA AAGTGCTGCA 
GCAGAAGAAA TGGCAAGTGC CATGGATGTT GCAAGTAGAA ATATAACAAG TGTTGCAGAA 
AAAATGGAAA CAGTTGTCGA AACAGCCAAA ATGCAACTTG AAAAAACTAC CGAAGTTAAG 
AATGCAGGTG ATGAACTATC TGAAATCTCT AAAAAGCTGT ACGATGAAGT TCAAAAATTT 
AAATTCTAA 

 

Protein sequence

MFRNMSIKSK LWLLIILASV VPLVIISTVA IVNSFQVGKE LGMESLKAIA RQGSSNLDNF 
LKGYINLVDF LSTDANVMGA YENKYDEVTW MMKTFKNIKE KYPDALWIYM GLSDKKFYIY 
PESDDLPPDY DPTVRPWYKD AVKNKGNVVI TEPYADASTG DIVITVAKAV VVNGKINGVV 
AIDFKASDLA KKLLSAKYGK DGYSYLLSSD GKTLLHSDNS KIGKSVANFD WFKKIKDKQE 
GAIEYEYEGV KKVVGFSKTE NGWIFASVAL QSEVNKKAIE IMIVLIIISL IAITIAFVFG 
TITGSSIVKP INKLVEIIEK VGQGDLSNRA VITSKDEVGH MANELNKALD NLSNLISEVN 
QNSVKLNKNA EKLSALSEAQ EEEVTTLTQN IEEINYEIQN ASSAIEETTS GVEEVAASAQ 
NVSKTSQDLT EKATEVSHAA KNSEKAIDTI NKIINNIMDK SLSMSEKVDL LSDNAKNIGE 
IVETISSIAE QTNLLALNAA IEAARAGEAG KGFAVVADEI RKLAEESKIA TDKITSILKN 
IQNGSEAVRK ETDDMVEIVT NASKESENVT VNLRGILAQI SDISGMIENL AAIAQEQSAA 
AEEMASAMDV ASRNITSVAE KMETVVETAK MQLEKTTEVK NAGDELSEIS KKLYDEVQKF 
KF