| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0318 |
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| Symbol | |
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| ID | 5297041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 323873 |
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| End bp | 324697 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640768576 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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| Protein accession | YP_001305575 |
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| Protein GI | 150020221 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAAA GTAGTGGTGC AGTCATTAGA TCATATGCAA AAATAAACCT TTTTCTTGAT
GTTACAAAAA AAAGGGATGA TGGGTACCAC GAAATCTTAT CGTTATTTCA AAATATCTCT
TTGTACGACC GCCTTATAAT TACAAAAATA GATAGAGGAC TTGAAATAAA GACTAATGTT
GATATTGAAA ACAACATTCT GTATAAAACT TGGGATGTAT TTTCTTCTAA TTTTAAGGAA
CCTGAGTTTG GACTTAGAAT AGTACTGGAA AAAAACATTC CCATGCAGGC AGGGTTAGGT
GGAGGAAGTT CTAATGCTGC AGCTCTGTTA TTCTATCTAT CAGACCAACT AAAAATACCA
AAAAACAAAA TAATAAAAAT AGCTGCAAAA ATAGGAAGTG ATGTACCGTT TTTCCTAATT
GGGGGAACAG CGGTAGTTAA AGGTAAGGGA GAAATTATAG AACCATTGCC CCCGTTGTTG
GGATATTACG TTAAATTAAT AACGGCAAAT GGGATCTCAA CAAAAGAGGC ATATAACCTT
TTAAACTCCA CATTATTCAA CAAAGCACCG TGTTCTCCAT ATGCTCTTTA TGAAGCATAT
TACCATAGAA ATATCGACGA AATAAAAAGA TGTACATACA ATATATTTGA AAAGGTTATA
GCAAAACAAA ACAGAGAAAT TGCACAAAAT ATTAAAAAAT TAAAGAAAAA TTCCATTGTT
TCAACGTTAA CAGGAAGCGG TAGTGCAGTA TATGGCATTT CCTTTAGAGA AGGAGATTTC
AACTTTGTAC CAAGGGGGGT AGAATATGAA GAAATTAACA TTTAG
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| Protein sequence | MEQSSGAVIR SYAKINLFLD VTKKRDDGYH EILSLFQNIS LYDRLIITKI DRGLEIKTNV
DIENNILYKT WDVFSSNFKE PEFGLRIVLE KNIPMQAGLG GGSSNAAALL FYLSDQLKIP
KNKIIKIAAK IGSDVPFFLI GGTAVVKGKG EIIEPLPPLL GYYVKLITAN GISTKEAYNL
LNSTLFNKAP CSPYALYEAY YHRNIDEIKR CTYNIFEKVI AKQNREIAQN IKKLKKNSIV
STLTGSGSAV YGISFREGDF NFVPRGVEYE EINI
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