Gene Tmel_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0243 
Symbol 
ID5298470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp247740 
End bp248465 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content35% 
IMG OID640768499 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_001305502 
Protein GI150020148 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.156632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGTTTG TGGATTTAAG GAGGTTAATT GAAGAGAAGA TAGGTGAGTA TAAAGAAAAG 
TATAGATTTA AATTGAGCGA TATTGAGGTG AAAAATGTAA ATGGTTATAT TGAACATACA
AATTTAAAGG CAACAACAAC AGATGATGAA ATAAAAAAAT TGTGTGAAGA AGCAAAAGTA
TATAATTTTA GAGGCGTCTG TGTAAATCCC TCCTTTGTTT CACTTGTAAA AGAAGAATTG
GAAGAGACAG ATGTTAAAGT TGTTACAGTA GTTGGATTTC CATTGGGAGC AACTTCCACT
AAATCGAAAG CATATGAAGC AAAAGTTGCA GTTGAAGATG GGGCAGATGA AATTGATATG
GTTTTACATA TAGGTCGTTT AAAAAGTGGT GATTATGACT ATGTTTATGA AGATATAAAG
AAAGTTGTTG AGACTTGTAA GAAACCTGTA AAGGTGATAA TAGAAACCTG CTATTTAACG
GATGAGGAAA AGATAGCTGC ATGTGTTATT TCAAAAGAAG CAGGTGCAGC TTTTGTAAAA
ACTTCTACTG GATTTGGTAG TGGTGGTGCA AAGGCAGAAG ATGTTAATCT TATGAGGTGG
GTTGTGGGTG ATTTAGGTGT TAAGGCATCA GGTGGTGTAA AAACATTTGA AGATGCAGTG
AAAATGATTA GGGCTGGGGC AAATAGTATA GGTACAAGTT CAGGAGTTTC CATAGTAGGA
AAGTAG
 
Protein sequence
MMFVDLRRLI EEKIGEYKEK YRFKLSDIEV KNVNGYIEHT NLKATTTDDE IKKLCEEAKV 
YNFRGVCVNP SFVSLVKEEL EETDVKVVTV VGFPLGATST KSKAYEAKVA VEDGADEIDM
VLHIGRLKSG DYDYVYEDIK KVVETCKKPV KVIIETCYLT DEEKIAACVI SKEAGAAFVK
TSTGFGSGGA KAEDVNLMRW VVGDLGVKAS GGVKTFEDAV KMIRAGANSI GTSSGVSIVG
K