Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0243 |
Symbol | |
ID | 5298470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 247740 |
End bp | 248465 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640768499 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001305502 |
Protein GI | 150020148 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.156632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATGTTTG TGGATTTAAG GAGGTTAATT GAAGAGAAGA TAGGTGAGTA TAAAGAAAAG TATAGATTTA AATTGAGCGA TATTGAGGTG AAAAATGTAA ATGGTTATAT TGAACATACA AATTTAAAGG CAACAACAAC AGATGATGAA ATAAAAAAAT TGTGTGAAGA AGCAAAAGTA TATAATTTTA GAGGCGTCTG TGTAAATCCC TCCTTTGTTT CACTTGTAAA AGAAGAATTG GAAGAGACAG ATGTTAAAGT TGTTACAGTA GTTGGATTTC CATTGGGAGC AACTTCCACT AAATCGAAAG CATATGAAGC AAAAGTTGCA GTTGAAGATG GGGCAGATGA AATTGATATG GTTTTACATA TAGGTCGTTT AAAAAGTGGT GATTATGACT ATGTTTATGA AGATATAAAG AAAGTTGTTG AGACTTGTAA GAAACCTGTA AAGGTGATAA TAGAAACCTG CTATTTAACG GATGAGGAAA AGATAGCTGC ATGTGTTATT TCAAAAGAAG CAGGTGCAGC TTTTGTAAAA ACTTCTACTG GATTTGGTAG TGGTGGTGCA AAGGCAGAAG ATGTTAATCT TATGAGGTGG GTTGTGGGTG ATTTAGGTGT TAAGGCATCA GGTGGTGTAA AAACATTTGA AGATGCAGTG AAAATGATTA GGGCTGGGGC AAATAGTATA GGTACAAGTT CAGGAGTTTC CATAGTAGGA AAGTAG
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Protein sequence | MMFVDLRRLI EEKIGEYKEK YRFKLSDIEV KNVNGYIEHT NLKATTTDDE IKKLCEEAKV YNFRGVCVNP SFVSLVKEEL EETDVKVVTV VGFPLGATST KSKAYEAKVA VEDGADEIDM VLHIGRLKSG DYDYVYEDIK KVVETCKKPV KVIIETCYLT DEEKIAACVI SKEAGAAFVK TSTGFGSGGA KAEDVNLMRW VVGDLGVKAS GGVKTFEDAV KMIRAGANSI GTSSGVSIVG K
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