Gene Tmel_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0199 
Symbol 
ID5297999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp207520 
End bp208146 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content32% 
IMG OID640768456 
Producthypothetical protein 
Protein accessionYP_001305461 
Protein GI150020107 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.184422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAA AAAATTATGA GTCTTTAACT ACACTTAATG TCTTTTTTTC TATTTCTGTT 
GTTGTTTCAA ATATAGTTGC AAGTAAGGTG ATAAAAATAG GTTGGTTTGT TGTTCCCTCG 
GCAGTTTTTG CTTATGCTAT AACCTTTTTG ATTACCGACA TTATTGATGA GATATGGGGG 
AAAAATGAGG CACAAAAAAC GGTTTGGAGG GGATTTTTTG CACAAATTTT TTCGTCAATA 
CTTATTTTAA CAGCTCAATG GTTGCCAGTA GCGCCTTTTA TGCCAGAACA ACAAAATCAT 
TTTGTTGCAG TTTTGGGGCA AAACTGGAGA TTTGCAATAG CATCCCTTAT TGCTTATCTT 
ATATCTCAAT CCATAGATGT TAATCTATTT TCTTTCTTTG GAAAATTAAC AAGGGGAAAG 
AAAAAGTGGA TTAGGAATAA TTTTTCAACT ATGACTTCTC AATTCATAGA TACTATGATA 
TTTATTACAA TAGCGTTCTT TGGTGTAGTG CCTAATTTGT GGCAGATGAT TATGTCTCAA 
TATTTGTTGA AATTAATAAT AGCTGCTGTA GATACTCCGT TTTTTTATCT GTTTACAAAG 
GGATATATCT TTGATTTTGA AAGTTAG
 
Protein sequence
MLKKNYESLT TLNVFFSISV VVSNIVASKV IKIGWFVVPS AVFAYAITFL ITDIIDEIWG 
KNEAQKTVWR GFFAQIFSSI LILTAQWLPV APFMPEQQNH FVAVLGQNWR FAIASLIAYL 
ISQSIDVNLF SFFGKLTRGK KKWIRNNFST MTSQFIDTMI FITIAFFGVV PNLWQMIMSQ 
YLLKLIIAAV DTPFFYLFTK GYIFDFES