Gene Tmel_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0185 
Symbol 
ID5298068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp195027 
End bp195485 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content28% 
IMG OID640768442 
Producthypothetical protein 
Protein accessionYP_001305447 
Protein GI150020093 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATTG AAGTAATAGT TCCTGGAAAG ATTTCAAAGC ACTTAAAAAG TGCTTTTGAT 
TTTTATTTAG ATAAGTTAAA AAGATTTTGT GATTTGAAAA TAAGTTTTGT AAGATTAGGT
GGGGATATTA ACAAAACCTC AAAGAGTGTT ATACTAAATA ATGAGGAAAA GGAAATTTTG
AATAAGCTTA AAGGAAGAAG TTTTGTTTTA CTTGATCTTT ATGGAAAACA GATTGATAGT
TTGGAATTTT CAAGTTTGTT GAAAAATAAA TTATTGGAAG GTAATTTGTG TTTTGTAATT
GGTGGCCCGC TAGGAATTAG TGAAAATTTG AGACGTATGT CTGAGAAGAG AATTTCGCTT
TCCAAATTGA CTTTTACTCA TGAAATGGCT TTAATATTGT TGCTTGAACA GTTATTTCGT
GGGTTTAAGA TAATTAATAA CGAAAAATAT CATTATTAG
 
Protein sequence
MKIEVIVPGK ISKHLKSAFD FYLDKLKRFC DLKISFVRLG GDINKTSKSV ILNNEEKEIL 
NKLKGRSFVL LDLYGKQIDS LEFSSLLKNK LLEGNLCFVI GGPLGISENL RRMSEKRISL
SKLTFTHEMA LILLLEQLFR GFKIINNEKY HY