| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0147 |
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| Symbol | |
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| ID | 5297088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 157930 |
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| End bp | 159318 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640768404 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001305409 |
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| Protein GI | 150020055 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000317216 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAGCATA GGGTAGATTT GTACAAACAG GGGATATTTA AATCACTCTT TTTGTTGGGG
TGGCCGTTAA TCGTTTCAAA TTTAATGCAA ACCTTTTACA ATGCGGTTGA TGCGTATTTT
CTTGGAAAAC TTGGGAAAGT TGAGTTTTCA GCGCCTACAA TAGTATGGCC ACTTATTTTT
GTTTTTATTT CACTTTCCAT AGGTTTTGCA CAGGCTGGTG TTACACTTGT TGCACAGTAT
ACAGGCGCTT CTTTAAAGGA AAAAGCAAAA AAATCTGCAG GACAAACGAT AACAATTTCA
ACAATTCTTG GTGTTGTTTT ATCGATTGTA GCAATCTTGA TTTCTAGACC TGTTATTACG
CTAATAGCAG GTAATGAAAG TAGAGAAGTA GTAAAATTTG CGGTTAGTTA TTTTAACATA
GTTATGATAG GACTTCCCTT TGGATTTATT TTTAACTCCG CGGCCTCTAT TTTAAGGGGT
TGGGGAGATT CAAAGTTTAC CATGAACCTA ATGTTTATTT CTACTGTGGT TAATATTATT
CTAGATCCAA TATTAATCTT TGGAGTTGGA TTTATACCAA AGATGGGTGT GGTAGGTGCT
GCTTGGGCAA CGACAATTGC AAGGATTGTA GCAGCGATAA TTTCAATTGA ACACTTGTTT
AAAGGAAAAA GAGGGTTTAA AATAGATTTG AATGATTTAA AACCTGATTT TGAACTAATA
AAAAGAGTGT TTAGGATAGG TATGCCAAGT TCTCTTAGTA TGAGTGTTAC ATCGTTGGGA
TTTGTTGTGA TTATGAAATT TGTTTCAAGT TTTGGTCCTA CAGTGGTGAG TGCCTATGGG
GTTGGAAATA GAATAATTAA TTTCATTACA ATGATTTCCT TTGGAATTGG AAATTCAGTT
ACAACAATGG TAGGTCAATT TCTGGGAGCA AATGATATAA AACGTGCAGA ACAGACGGTT
AAAGTAGCGT TTTTTGCAAA TTTTACCATT GTATTTACGT TGAGTGCTCT TACCTTCTTT
TTTGGAGGGC GACTTACACA ATTTTTTATT AACGACCCAG AGGTTATTAA AGTTGGATAT
ATCTTTTTTA AGTATGTTTC ATTTTCTTTG CCATTTTTTA CTTCAATGTC GGTGTTTATA
AACACACTTG TTGGTGCGGG AAGAACTGAA CTGGCAATGA TAATAGATAT AACTAGATTG
TGGGGAATTA GGGTACCTTT AATTGCAATT TTTTCAGCGA GATTTGGATT TACAGGATTG
TTTTTTGCGA TGATAATTAG TAATGTAGGT GCTATGATTC TGGCGTATTT GTTTGTGAAA
TTTTCCAAAT GGCAAAAAGC GATTATAAAA AGTGAAGAAA GGGGGGCTTT AGATGATATT
TACCAATAA
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| Protein sequence | MKHRVDLYKQ GIFKSLFLLG WPLIVSNLMQ TFYNAVDAYF LGKLGKVEFS APTIVWPLIF
VFISLSIGFA QAGVTLVAQY TGASLKEKAK KSAGQTITIS TILGVVLSIV AILISRPVIT
LIAGNESREV VKFAVSYFNI VMIGLPFGFI FNSAASILRG WGDSKFTMNL MFISTVVNII
LDPILIFGVG FIPKMGVVGA AWATTIARIV AAIISIEHLF KGKRGFKIDL NDLKPDFELI
KRVFRIGMPS SLSMSVTSLG FVVIMKFVSS FGPTVVSAYG VGNRIINFIT MISFGIGNSV
TTMVGQFLGA NDIKRAEQTV KVAFFANFTI VFTLSALTFF FGGRLTQFFI NDPEVIKVGY
IFFKYVSFSL PFFTSMSVFI NTLVGAGRTE LAMIIDITRL WGIRVPLIAI FSARFGFTGL
FFAMIISNVG AMILAYLFVK FSKWQKAIIK SEERGALDDI YQ
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