| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0092 |
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| Symbol | |
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| ID | 5296881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 97024 |
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| End bp | 97653 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768343 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001305354 |
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| Protein GI | 150020000 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000116234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAATC TAGAAAAATA TACCTTAGGG GAAGAGATTG CAAATGCCGT AACTCACGGT
GTAGGAGCTT TAGCAGCGCT ATTTGGTTTA ATTTGGTTGA TAATTTACTC ATCGTTTGGT
ACACCTTTAA AGATAGTTTC CTTTACAATT TATGGCTGTT CTTTATTTTT TTTATATTTA
ATCTCAACAC TATACCATAG TATGTGTAAT CAAAAAGCAA AGTATATTTT TGAGATAATG
GATCATTCTG CAATATTTCT GTTAATTGCG GGAACATATA CTCCATTTTT ATTGATGGTT
ATAAAAGGAA GCTTAGGTTG GACATTGTTT GCGGTAGTGT GGGTACTTGC AATATTTGGG
ATGGTATTTA AAGTATTTTT TGTAAGAGAT TTTATGGTAG TTTCAACTTT AATTTATATT
CTTATGGGGT GGATGATTGT GTTTTTTATA AAAAAATTGA TAATGAATTT TAACTCTTTT
GGTATTACTC TTTTAGTTAT AGGTGGTGTT TTGTATACAT TGGGAAGTAT ATTTTATATG
TACAGAAAAA TAAAATATCA TCATATGATT TGGCATTTAT TTGTTATTGC AGGGAGTGTG
TTTCACTATT TGGCAATCTT GCAGATATAG
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| Protein sequence | MKNLEKYTLG EEIANAVTHG VGALAALFGL IWLIIYSSFG TPLKIVSFTI YGCSLFFLYL
ISTLYHSMCN QKAKYIFEIM DHSAIFLLIA GTYTPFLLMV IKGSLGWTLF AVVWVLAIFG
MVFKVFFVRD FMVVSTLIYI LMGWMIVFFI KKLIMNFNSF GITLLVIGGV LYTLGSIFYM
YRKIKYHHMI WHLFVIAGSV FHYLAILQI
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