| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0084 |
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| Symbol | |
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| ID | 5297336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 89330 |
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| End bp | 90280 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640768335 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001305346 |
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| Protein GI | 150019992 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.978648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGC TTGTGTTAAC TAAGATTACA GATTATTTTA AAAAGAGAAT AGAAGAGTTT
AAGCAAATTG ATTGGTATAC AGATATTGAA TTGCTAGATG AGGTAGATAT AGTTGTAGGT
GGTTTTTTGA CAGAAGAACA AGTAAAAAAA GCAAAAAAGT TAAAGGCAAT TTTTGTTCCT
TGGACGGGGG CGGACAAATT ACCATGGAAA ATTTTAAAAG AAAGAAATAT TGTAGTTTCC
AATTCACATG GGAATGGAAA GATGGTTGCG GAGAGGGCTG TGGCTTTATC TTTGGCACTT
ATGGGAAGAG TGGTTGAATA TCATAATGAT CTTGAAAAGG GAATTTGGCA TGGATTTGCA
GTTGGATTTA AGGAAGAAGA TTATTGGTTT TCTTTGCAAA ATAAAAAAGT TGCTATATTG
GGTACAGGAG TTATCGGAAA AAATATAGCG AAGTTGTTGA AAGGGTTTAG TTGTTATATT
GTAGGGTTTA GAAATAAATT AGAACAGATA GGAGAGTTTG ATAAAATAAC AAATAAATTG
GATGAAGCAG TTAAAGAGGC GCAAGTTGTG TATTTGGCAT TACCTCTAAC CAATAAAACA
AAGTATATTA TTAATAGAGA ACTTCTTTTC AATATGGATG GAAAATTTTT AATAAATGTA
GGACGTGGAG AATTAATAGA TGAAAGTGCT TTATATGAAG TTCTTGAAAA GGAAATCTTA
AAAGGGTTTG CCTCAGATGT TTGGTATAAT TATCCTTCAA AAGAAAGGGA AATCATCTTG
CCTTTCAACT ATCCCATACA TAAATTTAAA AACGTTGTTT TGTCACCTCA TGTCGGTGGG
TATACAATAG AGGGACAAAA TGGAAGGATA GATGAATTGT TTAAAAATAT TAAGTCTTTT
TTAGAGACAG GAAAACCATT AACTATGGTT GATCCTGAGT TAATGTATTA G
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| Protein sequence | MKALVLTKIT DYFKKRIEEF KQIDWYTDIE LLDEVDIVVG GFLTEEQVKK AKKLKAIFVP
WTGADKLPWK ILKERNIVVS NSHGNGKMVA ERAVALSLAL MGRVVEYHND LEKGIWHGFA
VGFKEEDYWF SLQNKKVAIL GTGVIGKNIA KLLKGFSCYI VGFRNKLEQI GEFDKITNKL
DEAVKEAQVV YLALPLTNKT KYIINRELLF NMDGKFLINV GRGELIDESA LYEVLEKEIL
KGFASDVWYN YPSKEREIIL PFNYPIHKFK NVVLSPHVGG YTIEGQNGRI DELFKNIKSF
LETGKPLTMV DPELMY
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