| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0081 |
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| Symbol | |
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| ID | 5297718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 85686 |
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| End bp | 86618 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768332 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001305343 |
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| Protein GI | 150019989 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.201322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAG CCGTAGTTTG CGATAAAAAT ATAAACAATG AAGAGAAAAA AATGATAAAT
GCTATAAAAG ATGCAATTTC CAAAAAATAC AAATGTGAAA TTGTTAGATT TGATGAGGAT
TTTTTGAGAA AAATAAATAA ATATGATTTT GTTTTTAATC TTTCTAACAA AGGGGGAAAG
GAAGTAAAAC AAGTCCATGT TCCATCCGTG TTAGATTTTC TAGGTATTCC ATATACTTCT
TCAAATACAT TTACACATGC CATTTGTCTT GATAAAATCA CAACGAAAAT AATAATGAAG
CAATATAATA TTCCAACACC GGATTTTTAT GTGGTTGACG TAGGTGAAAT ACCAAATTAT
ATAGATGGTA AGTACATAGT AAAACCACCA CGTGAGGGAA GTGCAAAGGG TATTACAAAA
GATTCAATAG TGGATAATTT AGAAGATTTA AAAAAACAGG TGAAAAAAAT ACATGATGAA
TTTTCTCAGC CGGCACTTGT TGAAAAATTC ATAGATGGTC GGGAGTTTAG TGTAGGGGTA
ATAGGAAATA AAAAGCCTGA AGTATTACCT ATACTTGAAA TAGATTTTTC GTCGTTACCA
AAAGAACTTG AACGATTTTA TTCATATAGA GTAAAACACT ATTATGGAGA ACAAACAAGG
TATATTTGTC CGGCTAATTT AGATGTTGAT CTTGAGAAAA AAATAAAATA TTATGCACAA
AAACTTTTTA GGGTGCTGAA TTTAAGAGAT TATGCTAGAA TGGATTTAAG AATAAAAGGC
GGTGAAATAT ACTTTTTAGA AGTTAATTCT ATGCCACAAC TTGTTCCTGT TTATTCTGAT
ATTACAAAAA TGGCGAAAGC GGCTGGTTGT GATTATGATA AATTGGTTTT AAAGATTTTG
GAAATTTCTA TGGAAAGGTG GGGTTTGTTA TGA
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| Protein sequence | MKIAVVCDKN INNEEKKMIN AIKDAISKKY KCEIVRFDED FLRKINKYDF VFNLSNKGGK
EVKQVHVPSV LDFLGIPYTS SNTFTHAICL DKITTKIIMK QYNIPTPDFY VVDVGEIPNY
IDGKYIVKPP REGSAKGITK DSIVDNLEDL KKQVKKIHDE FSQPALVEKF IDGREFSVGV
IGNKKPEVLP ILEIDFSSLP KELERFYSYR VKHYYGEQTR YICPANLDVD LEKKIKYYAQ
KLFRVLNLRD YARMDLRIKG GEIYFLEVNS MPQLVPVYSD ITKMAKAAGC DYDKLVLKIL
EISMERWGLL
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