| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0065 |
|---|
| Symbol | gltX |
|---|
| ID | 5296716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 70362 |
|---|
| End bp | 71783 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640768317 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_001305328 |
|---|
| Protein GI | 150019974 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0249226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAGAC TACGTTTTGC TCCAAGTCCA ACTGGGTATT TACATGTTGG TGGTGCAAGA
ACAGCTTTGT TTAATTTTTT ATATGCAAGG AAAATGAAAG GAAGTTTTAT TTTAAGGATT
GAGGATACAG ATTTAGAGCG TTCCCAAAAA GAATATGAAG AAGGTTTGAT TAATGCCTTA
AAGTGGTTAG GTTTAGAATG GGATGAAGGA CCAGATGTAG GCGGGGATTT TGGACCATAT
AGGCAGAGTG AAAGATTAGA AATATATTGG AAATATGCAA GAAAACTTAT TGAAGAAGGA
AAGGCATATG AAGTTTATGC ATATCCAGAA GAAATAGAAA AACTTAGAGA AAAACTTCTA
GCTCAAGGAA AAGCACCACA TTATACTAGA GAAATGCTTC AGCAATTTAC TACACCCGAG
AGAATAAAAG AATATGAGAA AAAAGGTTTG AAACCTGCTA TTTACTTTGA AATGCCAAGG
AAGGAGTACG TATTGAACGA CATTGTAAAG GGAAGGGTTA TTTTTAAAAA AGGGACAGTT
GGTGATTTTG CGATAATTAG GAGTAATGGT GTGCCTATTT ACAATTTTGC ATGTGTAATA
GATGACCATC TGATGAATAT AACGCATGTT TTAAGAGGGG ACGATCACCT TTCAAATACA
GTAAAGCAAA TTGCTTTATA TGAAGCATTC AATTGGGAAA CTCCCGAATT TGGACATGTA
TCTATGATAT TGGGGCCAGA TGCAAAAAAA TTAAGCAAAA GACATGGTGC AACGTCAGTT
GAAGAGTTTA GAGATAGGGG ATATTTACCA CAAGCTGTAG TAAACTTTTT AGCATTACTT
GGATGGTCAC ATCCGGAAGG AAAAGAAATT ATGAATTTAA ATGAACTAAT TGATGCATTT
TCGTTGGATA GACTGGGGAA AAATCCTGCA ATATTTGATC CAAAAAAATT AAGGTGGATG
AATGCAGAAC ACTTTAGAAA TCTAAGTGAA GATAAGATGC TAGATGTTTC AAGAAAATAT
CTCTTAAAGT TTGTTACTGA AGATGAAATA GATAGCAGAA AAGATTGGTT TATTAGGCTA
TTGAAATCAA TAAAAGATAG GATTGAAGAA TTAAGTGAAA TACCTAATTT GGTAGAATTT
TTCTTTTTAG AACCTGATGT GACTGTGGAT TTGAGTGATG AAGTAAAAGA GGTTTATTTG
AGATTAATTG AAGAATTTGA AGAGGTCGAA GAATGGAATG AGAAAAATAT ATTAAATTCT
TTTAAGGCTG CGATGAAAGG TAGTAAAGTA AAGGGGAAAG AATTTTACAT GAAATTGCGG
ATAGTTTTAA CAGGTAGAGA AGAAGGGCCT GAGCTTATAG ATGTAGTTTA TCTACTTGGA
AAAGAAAATA TAATAAAGAG ATTAAAGAAG CATTTGGGGT GA
|
|---|
| Protein sequence | MVRLRFAPSP TGYLHVGGAR TALFNFLYAR KMKGSFILRI EDTDLERSQK EYEEGLINAL
KWLGLEWDEG PDVGGDFGPY RQSERLEIYW KYARKLIEEG KAYEVYAYPE EIEKLREKLL
AQGKAPHYTR EMLQQFTTPE RIKEYEKKGL KPAIYFEMPR KEYVLNDIVK GRVIFKKGTV
GDFAIIRSNG VPIYNFACVI DDHLMNITHV LRGDDHLSNT VKQIALYEAF NWETPEFGHV
SMILGPDAKK LSKRHGATSV EEFRDRGYLP QAVVNFLALL GWSHPEGKEI MNLNELIDAF
SLDRLGKNPA IFDPKKLRWM NAEHFRNLSE DKMLDVSRKY LLKFVTEDEI DSRKDWFIRL
LKSIKDRIEE LSEIPNLVEF FFLEPDVTVD LSDEVKEVYL RLIEEFEEVE EWNEKNILNS
FKAAMKGSKV KGKEFYMKLR IVLTGREEGP ELIDVVYLLG KENIIKRLKK HLG
|
|---|
| |