| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0063 |
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| Symbol | |
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| ID | 5298314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 67257 |
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| End bp | 68951 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640768315 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001305326 |
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| Protein GI | 150019972 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.051623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTT CTCAACTTTA TGCACCAACA TTAAGGGAAA ATCCCGCTGA TGCAGAAATT
CCAAGTCAAG CTCTTCTGCA AAGAGCAGGG TTTATAAGAA AAATAGCTGC TGGGGTATAT
ACTTATTTAC CACTTGCACG TAGGACACTT TTAAAGATAG AGAATATAGT AAGAGAGGAA
ATGGATAGAA TAGGTGCGCA AGAAATTTTG ATGCCTATAA TTCAACCTGC AGAACTTTGG
ATAAAGAGTG GCAGATGGGA TGACTATGGG CCTGAGATGA TGAAATTAAA GGATAGACAT
AATAGAGATT TTACCCTTGG GCCTACACAC GAGGAGCTTG TAACAGAACT TGTAAAAAAT
GAATTAAATT CTTATAAGCA GCTTCCAGTA ACGCTATATC AAATAGCAAA CAAATATAGA
GATGAAATAA GGCCAAGATT TGGTGTGTTG AGAGCTCGTG AATTTATCAT GAAAGATGCT
TATAGTTTTC ATGATAGTTG GGAATCTTTA GATGAAGTAT ACAAGAAATT TAAGGAAGCG
TATTCGCGGA TTTTAGAAAG AATAGGGCTT AGATATACAG TAATAGAAGC TTCTTCAGGT
GCAATTGGTG GAAAGGAATC ACATGAATTT GTTGCATTTG CAGAATATGG TGAAAGTAAT
ATTTTATATT GTGATTGTGG ATATGCAGGA AGTGATGAAA AGGTTCCTTA TATGGGAGAA
TACGAAGTTT TTGATGAAGA TGAAAAAGAA AGGGAACTTG TGCATACACC AAATGTTAGA
ACCGTTGAAG AAGTTGCACA ATATTTAGGT GTAGAAATAA AAAGAATAGT AAAATCATTG
ATTTTTAAAG GAAGAGATGG ATATGTAATG GTTTTGGTTC CAGGGAATAG GGAACTTAAT
TTTGAAAAAC TAAAAGCTTA TTTGGGAGAT CAGTCGCTAC AAATGGCATT GCCGGAAAAT
ATACTCGAAG ATTTTGGAGT TCCCATTGGT TTTTTAGGTC CTGTTGGAAT TTCTAATGTA
AAGATTGTAG CCGATAAAGG AATAAAGTAT ATGAAGAATT TTGTTGTTGG TGGCATGAAA
AAAAATTATC ACTATATAAA TGTGAATTTA GAAAGAGATT TTCAAGTGGA AGAATGGGCT
GATTTAGTTG TAGTAAATCC TGGTGAACCT TGTCCAGTTT GTGGTAAACC GTTAAAATCA
GAAAGAGGAA TTGAGTTAGG CCATATATTC AAGTTGGGGA CAAAATATTC AGAAACCATG
GATGTAAAGT ATATGAACAA GGATGGAAAA ATGAAACCAT TTATTATGGG TTGCTATGGC
TGGGGAATTT CGAGAACGTT AGGTGCTATT GTTGAGCAAT TACACGATGA TAATGGAATT
ATTTGGCCTG TGTCTGTTGC TCCTTACGAA GTGGTTATTA CCGTTGTGGG TAAGGAAAAT
GAAAAGAGTT TTGCAGAAAA GCTGTATAGA TATTTGTTAG ATAAAGGAGT AGATGTTTTA
ATAGATGATA GAGATGTTTC TCCTGGTGTT AAATTCAAGG ATGCAGATTT AATAGGTTTT
CCTTTGAGGA TAACTATTGG AAAGTCATAT AAAGATGGAA AAGTTGAGTT AAAAGAAAGA
GTTGGAAATG TAACTATCAT AGAGGCAGAT GAAGAAGTGA TTTTGAAGAA TGTTCAACAT
ATATTAAAAA GATAA
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| Protein sequence | MRFSQLYAPT LRENPADAEI PSQALLQRAG FIRKIAAGVY TYLPLARRTL LKIENIVREE
MDRIGAQEIL MPIIQPAELW IKSGRWDDYG PEMMKLKDRH NRDFTLGPTH EELVTELVKN
ELNSYKQLPV TLYQIANKYR DEIRPRFGVL RAREFIMKDA YSFHDSWESL DEVYKKFKEA
YSRILERIGL RYTVIEASSG AIGGKESHEF VAFAEYGESN ILYCDCGYAG SDEKVPYMGE
YEVFDEDEKE RELVHTPNVR TVEEVAQYLG VEIKRIVKSL IFKGRDGYVM VLVPGNRELN
FEKLKAYLGD QSLQMALPEN ILEDFGVPIG FLGPVGISNV KIVADKGIKY MKNFVVGGMK
KNYHYINVNL ERDFQVEEWA DLVVVNPGEP CPVCGKPLKS ERGIELGHIF KLGTKYSETM
DVKYMNKDGK MKPFIMGCYG WGISRTLGAI VEQLHDDNGI IWPVSVAPYE VVITVVGKEN
EKSFAEKLYR YLLDKGVDVL IDDRDVSPGV KFKDADLIGF PLRITIGKSY KDGKVELKER
VGNVTIIEAD EEVILKNVQH ILKR
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