Gene Tmel_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0054 
Symbol 
ID5298449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp57948 
End bp58328 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content32% 
IMG OID640768307 
Productribonuclease III 
Protein accessionYP_001305318 
Protein GI150019964 
COG category[S] Function unknown 
COG ID[COG1939] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0917731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATATCT TTTCTAAAGT AAAACCAAAT ATTAACATTA ACGAACTTTC AACTGACTCA 
TTGGCTTATA TTGGAGATGC GGTTTTTAAC CTATACGTAA AATTATACTA TTTCAAAAAA
ACTTCTGTGA GAAAACTTCA CAAAAATACC CATTCTATTG TGAACAGAGA TCATCAAGCG
CTTCTACTTG ACAAAATCCT TCCATTACTA ACAGAAGAGG AATTTTCTTA TGTCAAAAGA
GGAATAAATA GTAAAGGTGC AGGAAAATAC GGAAATGATC CCGCCTACAG AAAAAGCACA
GGTTTTGAAG TATTAATAGG ATTCCTTTAT TTAAAAAATG AGGATAGGCT TTATAACCTA
CTAACGGAGG TGTTAAAATG A
 
Protein sequence
MDIFSKVKPN ININELSTDS LAYIGDAVFN LYVKLYYFKK TSVRKLHKNT HSIVNRDHQA 
LLLDKILPLL TEEEFSYVKR GINSKGAGKY GNDPAYRKST GFEVLIGFLY LKNEDRLYNL
LTEVLK