| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0050 |
|---|
| Symbol | |
|---|
| ID | 5296759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 53426 |
|---|
| End bp | 54817 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640768302 |
|---|
| Product | FeS assembly protein SufB |
|---|
| Protein accession | YP_001305314 |
|---|
| Protein GI | 150019960 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.280227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATG TAAAAAGCAA TGAAGAAAAG TTTAATTATA TAGCAAACAT TGAGCCAGAA
TATGTAAGTT TGCCTGGTTT AACGCCAAAG ATAATTGAAG AAATTTCAGA TATAAAGGAA
GAACCAAAAT GGATGCGTGA GCATAGATTA AAATCTTTAG AGATTTTTCA AAGATGGCAT
AATCCGAGAT TTGGTGTAGA TATTTCTGGT TTAGATTTGA GCAAAATTAT TCCTTATATA
AAACCAAAGG CAAGGAAAAA TACAACATGG GATGAAGTTC CGGAGGAAAT TAAAAAAGCT
TTTGACAAAT TAGGCATTCC TGAAGCGGAA AGAAAATATT TTGCAGGTGT TGGTGCACAA
TTTGATTCTG AAATTGTTTA TCAAAATATA AAAGAGGAAT TGGAAAGTTT AGGAATAATT
TTTCTAGACA TGGAAAGTGC GGTAAAACAA TATCCTGATC TTGTAAGGGA ATATTTTATG
AGATTAGTTC CTACGCATGA TCACAAATTT GCCGCATTAC ATGGGGCAAT TTGGAGTGGT
GGAACATTTT TGTACGTTCC AAAAGGTGTT AAGGTTCCAA TGCCATTACA GGCATATTTT
CTCATGAGTA ATCCTGGAAT GAGTCAGTTA GAACACACTA TAATAGTTGC AGATGAAGGT
TCAGAGGTTA TATTTATAGA AGGTTGTTCT GCTCCAAGGT ATAATGTAAT TAACTTACAT
ACGGGTATGG TAGAAATATA TGTAAAAAAA CATGCAAAGG TTAAATATAT GACTATTCAA
AATTGGAGTA AGAATACATA TAATTTAAAC ACAAAACGTT CAATTGTTGA AGAAGATGGT
GTAATGTCAT GGGTTTCTGG TTCATTAGGG AGCATGAAAA CAATGTTATA TCCAATGACC
ATTCTAAAGG GGAAAGGTGC AAAAGCAGAA AGTTTGGGTA TTACCTATGC AGGTCCGGGT
CAACATATGG ATACGGGTTC TAAAGTAGTG CATCTTGCAC CTTACACAAG CTCAACTATA
GATGCAAGAA GTATAAGTGT TGGAGGAGGT TGGGCATTTT ATAGAGGACT TTTGAAGGTG
GCTAAAGATG CTAAGAAAAG TAAATCTCAT GTACAATGTA CCGCTCTTAT GTTGGATAAT
TACTCAAAGA GTGATACCGT TCCTATTATT GAGGTTTACA ATAACGATGC CGATATTGGG
CATGAGGCGA GAATAGGTAG GATTAAAGAT GAACAGATTT TCTATCTTAT GTCTAGAGGA
TTGAATGAGG CTGAGGCAAA AAGTATGATT GTAAAGGGGT TTATTGAACC AATAGTAAGT
AGTTTACCAT TTGAATATGC GGTTGAATTA AATAGATTAA TTGAAATGGA AATAGAATCA
ACAATAGGGT GA
|
|---|
| Protein sequence | MFDVKSNEEK FNYIANIEPE YVSLPGLTPK IIEEISDIKE EPKWMREHRL KSLEIFQRWH
NPRFGVDISG LDLSKIIPYI KPKARKNTTW DEVPEEIKKA FDKLGIPEAE RKYFAGVGAQ
FDSEIVYQNI KEELESLGII FLDMESAVKQ YPDLVREYFM RLVPTHDHKF AALHGAIWSG
GTFLYVPKGV KVPMPLQAYF LMSNPGMSQL EHTIIVADEG SEVIFIEGCS APRYNVINLH
TGMVEIYVKK HAKVKYMTIQ NWSKNTYNLN TKRSIVEEDG VMSWVSGSLG SMKTMLYPMT
ILKGKGAKAE SLGITYAGPG QHMDTGSKVV HLAPYTSSTI DARSISVGGG WAFYRGLLKV
AKDAKKSKSH VQCTALMLDN YSKSDTVPII EVYNNDADIG HEARIGRIKD EQIFYLMSRG
LNEAEAKSMI VKGFIEPIVS SLPFEYAVEL NRLIEMEIES TIG
|
|---|
| |