| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0041 |
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| Symbol | |
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| ID | 5296873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 44469 |
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| End bp | 45089 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640768291 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_001305305 |
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| Protein GI | 150019951 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0878225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAAAAT ACAACCTGAG AGTAAAAAGA ACTGAAAAAT TAGTTGAACT TGCCCAAAGT
GGATTGATGG AGGCTTTGGA ATTAATAATT GAAAGATACT ATCCAATGGT GGTCAAGATT
TCATCAAAAT ACTATGCCCC ATGGGCTGAA TTTGAAGATA TAGTTCAAAA TGGCCTTATT
GGACTTATTA AAGCTGTTTT CTATTTCAAT TTTGAAAAAA GCTCCTTCAA CTCATTTGCT
TGGAGAAGTA TAGAAAGTGA AATACAAACC TTTATAACTT ACCTTAACAG AAGAAAAAAC
AAAATATTGT CTGAATCTTC GAGTATTGAC GTATTTGATG AAGAAGAGGG AACTGAGCAA
GCAGATTATT CCCTTGCAGA TAAAGAATCA AATATTATAA AAACCGCATT TATCCAGATA
ATCAAAGAAA AAATCACACT GTATTTAAAA GATATTGAAC TGGATATATT TGAAATGTGG
TTAGATGGAT ATAGTTACAA AGAAATTGAA AAAGAATTAA ACATAAACTT TAAAAAAATA
GACAACACAA TACAAAAGGT AAAACGTATA GGAAGAACAA AAATAGATAA ATTTATATTA
GACCAAGTAT TTACAAATTA A
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| Protein sequence | MIKYNLRVKR TEKLVELAQS GLMEALELII ERYYPMVVKI SSKYYAPWAE FEDIVQNGLI
GLIKAVFYFN FEKSSFNSFA WRSIESEIQT FITYLNRRKN KILSESSSID VFDEEEGTEQ
ADYSLADKES NIIKTAFIQI IKEKITLYLK DIELDIFEMW LDGYSYKEIE KELNINFKKI
DNTIQKVKRI GRTKIDKFIL DQVFTN
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