Gene Tmel_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0031 
Symbol 
ID5297023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp34601 
End bp35395 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content33% 
IMG OID640768281 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001305295 
Protein GI150019941 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTTG GAATAGTTGG TGGAGGGCCT GCTGGTATTT CCGCGGCAAT TTTCTTAAAG 
CGGTATGGTA TTGATTGTAC AGTTTTTGAA AAAAAATCAT TGGGTGGATT ATTGAGAAAT
GCGTGGAGAG TTGAAAATAT TCCTCTTTTT AAACCTACTT CCGGAGAAGA TATAGTAAAG
ATTATGAACT CATATTTGAA AATTTATGAT GTGAAAGTTG TCTTTGATGA AGTAACAACA
GTTAATAAAA ATGAAATTGT TACAAGAAAT GGAAGATATT TTTTTGATGA AATTATTGTA
GCAAGTGGTA CTGTTCCAAA TAGAATAGTG GGGTTTGAAA ACGAAAGAGT GGCCTACGAA
TATACTGACC TTTTTGAATT TAATTCACTT GCAATATACG GTGCTGGAGA TGTTGCATTT
GATGGTGCAA TAAAAGCAAA GTTGGAGGGG AAAAAAGTTT CAATTTTTTC TAGAAATGTG
AAAGTGAAGG CAGTTCCAAT ATTGTTTGAA ACAGCAAAAA AATTGGGAAT AGATATGCAT
TTAGGTGAAG AGATAAAGGA TGTAGAATAT AAAAAAAATT ATGTTGAGAT TCATACGGCA
GTGAATACTT ACAAATTTGA TAAGTTGCTT TTGGCAATTG GTAGAAAAAT TGATTTGTCA
TTTGTAAAAA CATCAGATGT TTATTTGATA GGAGATGTGG CACATCCTGA TTTTAGACAG
GCTTCCATAG CGGTAAGTGA TGGTATAAAG ATTGCGATGA AGATTTTAAG GAGGGGAGAA
GATTGGAAAT ATTAA
 
Protein sequence
MRVGIVGGGP AGISAAIFLK RYGIDCTVFE KKSLGGLLRN AWRVENIPLF KPTSGEDIVK 
IMNSYLKIYD VKVVFDEVTT VNKNEIVTRN GRYFFDEIIV ASGTVPNRIV GFENERVAYE
YTDLFEFNSL AIYGAGDVAF DGAIKAKLEG KKVSIFSRNV KVKAVPILFE TAKKLGIDMH
LGEEIKDVEY KKNYVEIHTA VNTYKFDKLL LAIGRKIDLS FVKTSDVYLI GDVAHPDFRQ
ASIAVSDGIK IAMKILRRGE DWKY