Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0016 |
Symbol | |
ID | 5296851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 17183 |
End bp | 18280 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640768265 |
Product | basic membrane lipoprotein |
Protein accession | YP_001305281 |
Protein GI | 150019927 |
COG category | [R] General function prediction only |
COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TACTTATTTT TGCTTTGGCG GTGCTTTTCG TAATAAGTGC ATTTTCATTT AAAGCTATTA TGGTAACTGA TACTGGTGGC CTTGGTGACA AATCATTTAA CGACGGTACA TGGTCTGGTA TACAAAGAGC AGGAAAAGAA CTTGGAATTG AAACAATGGT GATACAATCT TACGAACAGG CAGACTACGT TTCTAACCTT ACAAAAGCTG CTCAAGAAGT TCAAAAAGAA CCAGATGGCG GAATAGTATA TGCTGTTGGA TTCATGATGA CCGATGCATT GTTTGAAGTT GCACAACAAT TTCCAGATGT ATATTTCGCA GGAATAGATA TTGCTCCTCC ATCAGAAAAT GTTCCACCAA ATGTCATCTG TTTCTTATTC AAAGAACAAG AATCTGCATT CTTAGTTGGT TATATTGCAG CAGCAACAAC AAGAGCTGGA AAAGTTGGTT TTATTGGTGG TATCCCAATT CCTCCAGTTG AAAGATTCAG ATATGGATTT GAAACTGGTG TAAAGGTATA CAACAATATT CATGGTACAA ATGTTGAAAT ATTAAAAGGC TACACAAACC ACTTTAGTGA TCCAAAAAAG GGTAAAGATC TCGCACTTTC CCAATTTGCT GAAGGTGTAG ACATTATATT CCATGCAAGT GGTGCTTGTG GAAACGGTGT TATTGAAGCT GCAAAAGAAA AAATGGTATC TTTAGTTGGA AAAAATGATC TTGTTTCTAT ATTAGATTAC GCATATAACA ATGGTGGTTA TTTTGCAATG GGTGTCGACG TTGATCAAGA TTACATGGCA CCTGGTGTAG TTCTTGCAAG TGCAATGAAA GGTGTAGATA CTGCTTCTTA TTATGGTGTA AAATGGGCAT ATGAAGGTAA TTGGGACCCT GGAATTCACA CACTAGGTCT CAAAGAAAAT GGTGTAAGAA TGAGTCCTAT GAAATATACA AAAGGATTAG TGGATAACAG AACTCTTGCA GAGCTTGCAT ATCTTGTAAC ATTAATCAAA AATGGAATTC TCGTAGTTCC AGACACAGAA GAAGCATTAA AATCCTTTAG AACTCCAAAA ATTGTATTCC CATTTTAA
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Protein sequence | MKKLLIFALA VLFVISAFSF KAIMVTDTGG LGDKSFNDGT WSGIQRAGKE LGIETMVIQS YEQADYVSNL TKAAQEVQKE PDGGIVYAVG FMMTDALFEV AQQFPDVYFA GIDIAPPSEN VPPNVICFLF KEQESAFLVG YIAAATTRAG KVGFIGGIPI PPVERFRYGF ETGVKVYNNI HGTNVEILKG YTNHFSDPKK GKDLALSQFA EGVDIIFHAS GACGNGVIEA AKEKMVSLVG KNDLVSILDY AYNNGGYFAM GVDVDQDYMA PGVVLASAMK GVDTASYYGV KWAYEGNWDP GIHTLGLKEN GVRMSPMKYT KGLVDNRTLA ELAYLVTLIK NGILVVPDTE EALKSFRTPK IVFPF
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