| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0008 |
|---|
| Symbol | |
|---|
| ID | 5297426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 8798 |
|---|
| End bp | 10666 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640768257 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_001305273 |
|---|
| Protein GI | 150019919 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGATTTG GTAATTTTGA AACCAAAAAT TACATATTTA TGGCTCCGAT AAAAACAGCA
CTTGCCACAC CGAAAACAGG TTTAATTACT GATGAGCAAA TAAAGTATTA TGAAAATAAA
GCAAAAGGTG GGGTTGGAAC AATAATATTT GAACCTATTT CAGTTTTACC AAATGGAAAA
GAACATCCTA AGCAGACTAT GTTGAATACT GACGCTCATA TTGAAGGTTT AAAAAGACTA
GTAGATACTT TACATAAATA TGATACTAAA TTAGTTGTTC ATTTAAACCA TGCTGGAAGA
GCAGCTAATC CAAAAGCTTC TGGAGAAGTT GTCGCTCCAT CGTCAGTTAT TTGTCCATCT
ACTGGGCAAA CTCCAAGAGA ATTGACACAG AAGGAAATAT GGGAAATTAT TCATGCATTT
AAAGAAAACG CACTACGTGC ACAGGAAGCG GGAGCTGATG CTATTGAAAT ACAATTTGGA
CATGGTTATA TTGTACATCA ATTTTATTCT GAAAGGATGA ACAAAAGAAA AGATGAATAT
GGAAAGGATA AGCTAAAGTT TGCGAAGGAA CTTTTATCCG CGATAACATC AGAGATAAAA
ATACCGTTGT TTTTAAGAAT TTCAGGAAGT GAGTTTGTTG ATGGAGGAAT AACATTAGAA
GAACTTTCGC GAATTTTTCT ACTTGCACAA GAATTTGGGG TTTCAGTTAT TCACGTTGGT
TGGGGTAATG CTTGCGATTC GGCACCTTGG TATTATAATC ATATGTCATT GCCTTTAAAA
GTAATGGATG ATAAGTTAAG AGAAATAAGA AATTTAACAT CACTTCCTAT AATCGCAGTT
GGTAGAATGC AAAAAGACGA AAGATATAAA AAACTCATGG ATGATAAGGT TATAGATGGG
GTAGTTTTTG GAAGGCAGTT AATTATAGAT CCAGGATTTC CAAAGAAAAT ATTATCAAAT
TCTGATGATT ATATTAGATG TGGTAGTTGT TTGCAAGGAT GTTTGGGAAA CGTGAAAGCC
GGAAGAGAAA TTGGTTGTAT TGCAAATCCT GAAGTTCATA GTAGCTTTAA TAGTAAAACT
AGTACTAACA GAAAGAAGGT AGCTATAGTT GGTGGTGGCC CAGCGGGATT GTTTGCGGGA
TTGTATTTGA AGAAGAAAAA TTATGATGTT ACAATATTTG AAAAAAATTC TTATCTAGGT
GGTCAATGGG TTTTAGCTTA TAAATCACCA GGTAAGTTGT CTATGAAAGA TACTTTAGAG
GATTTGATAA AAAAGGCTAA AAAAGAGTTG AAAATAAGAT TAAACACAGA AGCTACTTTG
GATACATTTA GAAGTGAAAA ATTTGAAATA ATAATTGTAG CAACCGGTGC TAAACCATTT
GTTCCAAATA TTCCAGGATT GGAAAATTTT ATAACTGGTT TTGATTTCTT TAATGGTAAA
AAAGTTGATG GTGAAAAGGT GTTGATTATT GGTGGAGGTT TAATAGGACT TGAAGTTGCT
GAAGCATTGA TAATCGAAGG AAAAAAGGTT ACTGTAGTTG AGATGTTAGA ACAAGTTGGG
AGAGGTATGG AGATTGTAGC TAGTAAACTA TTTCAGAAAA ATTATGCACC GAAGATTTCA
ATTTATACAA ATACTTTGGT TAAAGAAATT AATGGGAAAA ATGTAGTTGC GCAAACAAAA
GATGGAAGAG AATTTTCTTT AGGAGAGTTT GACAGCATAA TTGTAACAGC TGGGACAAAG
CCTGAAAATA AGTTATATGA AGAATTATCA AGAGAATTTA AAAATGTTTA TTTAATAGGT
GACGCAGCAA AAATTGGTCA GATTATAGAT GCGGTACAAG ATGCTTTTGA ATTAGCTGAA
GAAATTTAA
|
|---|
| Protein sequence | MRFGNFETKN YIFMAPIKTA LATPKTGLIT DEQIKYYENK AKGGVGTIIF EPISVLPNGK
EHPKQTMLNT DAHIEGLKRL VDTLHKYDTK LVVHLNHAGR AANPKASGEV VAPSSVICPS
TGQTPRELTQ KEIWEIIHAF KENALRAQEA GADAIEIQFG HGYIVHQFYS ERMNKRKDEY
GKDKLKFAKE LLSAITSEIK IPLFLRISGS EFVDGGITLE ELSRIFLLAQ EFGVSVIHVG
WGNACDSAPW YYNHMSLPLK VMDDKLREIR NLTSLPIIAV GRMQKDERYK KLMDDKVIDG
VVFGRQLIID PGFPKKILSN SDDYIRCGSC LQGCLGNVKA GREIGCIANP EVHSSFNSKT
STNRKKVAIV GGGPAGLFAG LYLKKKNYDV TIFEKNSYLG GQWVLAYKSP GKLSMKDTLE
DLIKKAKKEL KIRLNTEATL DTFRSEKFEI IIVATGAKPF VPNIPGLENF ITGFDFFNGK
KVDGEKVLII GGGLIGLEVA EALIIEGKKV TVVEMLEQVG RGMEIVASKL FQKNYAPKIS
IYTNTLVKEI NGKNVVAQTK DGREFSLGEF DSIIVTAGTK PENKLYEELS REFKNVYLIG
DAAKIGQIID AVQDAFELAE EI
|
|---|
| |