Gene Tmel_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0006 
Symbol 
ID5296579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp6140 
End bp6805 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content27% 
IMG OID640768255 
Producthypothetical protein 
Protein accessionYP_001305271 
Protein GI150019917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0780493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTTT TTATAATTGA GTTTTACAAT TTGCTAAAAA GGCGCGAAAC GTTAATAATG 
ATTGGATTAA TTATTTTATC TTCAGTCTTT ATCCCCTGGT CTTTAAAGAA CATGCCAGAT 
TTTTGGCTTT ATCATGGTGA GGATCTTGAA AATGCAAGAT ATGTTAATTT GCGTATGGAA 
TTTTTCACAC ATGTTTGGTA TTTGTATATG GTTTCATTTG GAATGTTTTT ATATCCGTTG 
TATGGTATAG CGATAGGGGA TATTACTTAT GATGTTAAAT ATAACCGAAT TCATACAGTA 
ATATTTTATG GTAAAAGCAG AAGTAAATAC CTTAACGGAA GATTTTTTTC GGAATTCTTT 
TTGCTTTTAT GTGTGATGTT GGTTAATTTA TTTGTTTTAT ATGTTGGTTG GTTTTTAAAT 
GTGAAAGATA GAGAATTAAT GGGTTTAAAC ATGGATGTTC TATTTGTTTT GTATATATTT 
ATTTCCATTT TCTTTGGAAC GCTGATAGTT AGGAATATTA GTAAATTTAT TTCTTTAAAG 
TTTCACAACC TGGTAAAATC CTATTTGATA TCTATTATAG TTTTTGTTTT ACTTGTATAT 
CTTTCTTTTA CTTCCTTGGG AGAATTTTTA CTTTTTTTCT GTATGAAAGA AAATTTGAAA 
AATTGA
 
Protein sequence
MRVFIIEFYN LLKRRETLIM IGLIILSSVF IPWSLKNMPD FWLYHGEDLE NARYVNLRME 
FFTHVWYLYM VSFGMFLYPL YGIAIGDITY DVKYNRIHTV IFYGKSRSKY LNGRFFSEFF 
LLLCVMLVNL FVLYVGWFLN VKDRELMGLN MDVLFVLYIF ISIFFGTLIV RNISKFISLK 
FHNLVKSYLI SIIVFVLLVY LSFTSLGEFL LFFCMKENLK N