Gene TBFG_13693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13693 
Symbol 
ID5224383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp4115033 
End bp4116679 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content67% 
IMG OID640608463 
Productdipeptide-transport ATP-binding protein ABC transporter dppD 
Protein accessionYP_001289620 
Protein GI148824866 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones275 
Plasmid unclonability p-value0.373881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones192 
Fosmid unclonability p-value0.206528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC CAGCAGCGCC GCTGTTGTCG GTGGAGGGCC TGGAAGTTAC GTTCGGCACC 
GATGCTCCCG CCGTGTGTGG GGTGGATCTG GCCGTCCGGA GCGGTCAAAC CGTCGCCGTG
GTGGGTGAGT CCGGGTCGGG CAAATCCACG ACGGCCGCGG CGATTCTTGG GTTGCTTCCG
GCTGGTGGAC GGATCACCGC TGGACGCGTT GTGTTCGACG GGCGCGACAT CACCGGGGCC
GATGCCAAGC GGCTACGGTC GATAAGGGGA CGGGAGATCG GCTATGTTCC CCAGGATCCG
ATGACCAACC TCAATCCGGT TTGGAAGGTC GGCTTTCAGG TCACAGAAGC GTTGCGGGCC
AATACCGACG GTCGCGCAGC ACGACGACGG GCGGTGGAGC TACTCGCTGA GGCGGGCCTG
CCGGATCCGG CGAAGCAAGC CGGACGCTAC CCGCATCAGC TGTCCGGCGG CATGTGCCAG
CGGGCGTTGA TTGCGATCGG CTTGGCGGGC AGGCCGCGGC TGCTGATCGC CGATGAGCCG
ACGTCCGCGT TGGATGTCAC CGTGCAGCGG CAGGTGCTCG ATCATCTTCA GGGACTCACC
GACGAACTAG GCACCGCGCT GCTACTGATC ACCCACGATC TGGCGTTGGC CGCGCAGCGG
GCCGAGGCTG TCGTCGTCGT CCGTCGTGGA GTGGTGGTGG AATCCGGTGC GGCGCAGTCA
ATCCTGCAAA GCCCTCAGCA CGAGTACACC CGGCGCCTGG TGGCCGCGGC TCCATCGCTG
ACGGCGCGCA GCAGACGTCC GCCGGAATCC CGGTCACGGG CAACCACGCA GGCCGGCGAC
ATTCTCGTCG TCTCGGAGCT GACCAAGATT TACCGGGAGT CCCGCGGCGC ACCGTGGCGG
CGGGTGGAGT CTCGCGCCGT CGACGGAGTG TCATTCCGGC TACCGCGGGC GAGCACCCTG
GCAATCGTCG GCGAATCCGG GTCAGGCAAG TCGACGCTAG CGCGGATGGT GCTTGGGCTG
CTCCAACCTA CCTCGGGCAC GGTCGTTTTC GACGGCACCT ACGACGTCGG CGCGCTGGCC
CGGGACCAGG TGCTGGCCTT TCGCCGCCGG GTCCAGCCGG TGTTCCAAAA CCCATACAGC
AGCCTGGATC CCATGTACTC GGTGTTTCGC GCCATCGAGG AACCGTTACG CGTCCATCAC
GTCGGTGACC GCCGGCAGCG GCAAAGGGCG GTGCGTGAGC TGGTCGATCA GGTGGCGCTG
CCGTCGTCGA TACTGGGCCG GCGGCCCCGT GAGCTGTCGG GTGGTCAGCG GCAGCGGGTA
GCGATCGCGC GTGCGCTGGC GCTGCGCCCG GAGGTATTGG TGTGCGACGA AGCGGTGTCG
GCGCTCGACG TATTGGTGCA GGCACAGATC CTGGATCTGC TGGCCGATCT GCAGGCCGAC
CTGGGTTTGA CGTATTTGTT CATCAGCCAT GATCTGGCGG TGATCCGGCA GATTGCCGAC
GACGTCCTGG TCATGCGGGC CGGCCGGGTG GTGGAGCACG CCTCTACCGA GGAGGTGTTC
AGCCGGCCCC GCCACGAGTA CACCCGCCAG TTGCTTCAGG CCATTCCCGG TGCCCCCTCA
GCTCCCCGAA AGGTTGGCAA CCTGTGA
 
Protein sequence
MSVPAAPLLS VEGLEVTFGT DAPAVCGVDL AVRSGQTVAV VGESGSGKST TAAAILGLLP 
AGGRITAGRV VFDGRDITGA DAKRLRSIRG REIGYVPQDP MTNLNPVWKV GFQVTEALRA
NTDGRAARRR AVELLAEAGL PDPAKQAGRY PHQLSGGMCQ RALIAIGLAG RPRLLIADEP
TSALDVTVQR QVLDHLQGLT DELGTALLLI THDLALAAQR AEAVVVVRRG VVVESGAAQS
ILQSPQHEYT RRLVAAAPSL TARSRRPPES RSRATTQAGD ILVVSELTKI YRESRGAPWR
RVESRAVDGV SFRLPRASTL AIVGESGSGK STLARMVLGL LQPTSGTVVF DGTYDVGALA
RDQVLAFRRR VQPVFQNPYS SLDPMYSVFR AIEEPLRVHH VGDRRQRQRA VRELVDQVAL
PSSILGRRPR ELSGGQRQRV AIARALALRP EVLVCDEAVS ALDVLVQAQI LDLLADLQAD
LGLTYLFISH DLAVIRQIAD DVLVMRAGRV VEHASTEEVF SRPRHEYTRQ LLQAIPGAPS
APRKVGNL