Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13693 |
Symbol | |
ID | 5224383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 4115033 |
End bp | 4116679 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640608463 |
Product | dipeptide-transport ATP-binding protein ABC transporter dppD |
Protein accession | YP_001289620 |
Protein GI | 148824866 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 275 |
Plasmid unclonability p-value | 0.373881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 192 |
Fosmid unclonability p-value | 0.206528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCC CAGCAGCGCC GCTGTTGTCG GTGGAGGGCC TGGAAGTTAC GTTCGGCACC GATGCTCCCG CCGTGTGTGG GGTGGATCTG GCCGTCCGGA GCGGTCAAAC CGTCGCCGTG GTGGGTGAGT CCGGGTCGGG CAAATCCACG ACGGCCGCGG CGATTCTTGG GTTGCTTCCG GCTGGTGGAC GGATCACCGC TGGACGCGTT GTGTTCGACG GGCGCGACAT CACCGGGGCC GATGCCAAGC GGCTACGGTC GATAAGGGGA CGGGAGATCG GCTATGTTCC CCAGGATCCG ATGACCAACC TCAATCCGGT TTGGAAGGTC GGCTTTCAGG TCACAGAAGC GTTGCGGGCC AATACCGACG GTCGCGCAGC ACGACGACGG GCGGTGGAGC TACTCGCTGA GGCGGGCCTG CCGGATCCGG CGAAGCAAGC CGGACGCTAC CCGCATCAGC TGTCCGGCGG CATGTGCCAG CGGGCGTTGA TTGCGATCGG CTTGGCGGGC AGGCCGCGGC TGCTGATCGC CGATGAGCCG ACGTCCGCGT TGGATGTCAC CGTGCAGCGG CAGGTGCTCG ATCATCTTCA GGGACTCACC GACGAACTAG GCACCGCGCT GCTACTGATC ACCCACGATC TGGCGTTGGC CGCGCAGCGG GCCGAGGCTG TCGTCGTCGT CCGTCGTGGA GTGGTGGTGG AATCCGGTGC GGCGCAGTCA ATCCTGCAAA GCCCTCAGCA CGAGTACACC CGGCGCCTGG TGGCCGCGGC TCCATCGCTG ACGGCGCGCA GCAGACGTCC GCCGGAATCC CGGTCACGGG CAACCACGCA GGCCGGCGAC ATTCTCGTCG TCTCGGAGCT GACCAAGATT TACCGGGAGT CCCGCGGCGC ACCGTGGCGG CGGGTGGAGT CTCGCGCCGT CGACGGAGTG TCATTCCGGC TACCGCGGGC GAGCACCCTG GCAATCGTCG GCGAATCCGG GTCAGGCAAG TCGACGCTAG CGCGGATGGT GCTTGGGCTG CTCCAACCTA CCTCGGGCAC GGTCGTTTTC GACGGCACCT ACGACGTCGG CGCGCTGGCC CGGGACCAGG TGCTGGCCTT TCGCCGCCGG GTCCAGCCGG TGTTCCAAAA CCCATACAGC AGCCTGGATC CCATGTACTC GGTGTTTCGC GCCATCGAGG AACCGTTACG CGTCCATCAC GTCGGTGACC GCCGGCAGCG GCAAAGGGCG GTGCGTGAGC TGGTCGATCA GGTGGCGCTG CCGTCGTCGA TACTGGGCCG GCGGCCCCGT GAGCTGTCGG GTGGTCAGCG GCAGCGGGTA GCGATCGCGC GTGCGCTGGC GCTGCGCCCG GAGGTATTGG TGTGCGACGA AGCGGTGTCG GCGCTCGACG TATTGGTGCA GGCACAGATC CTGGATCTGC TGGCCGATCT GCAGGCCGAC CTGGGTTTGA CGTATTTGTT CATCAGCCAT GATCTGGCGG TGATCCGGCA GATTGCCGAC GACGTCCTGG TCATGCGGGC CGGCCGGGTG GTGGAGCACG CCTCTACCGA GGAGGTGTTC AGCCGGCCCC GCCACGAGTA CACCCGCCAG TTGCTTCAGG CCATTCCCGG TGCCCCCTCA GCTCCCCGAA AGGTTGGCAA CCTGTGA
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Protein sequence | MSVPAAPLLS VEGLEVTFGT DAPAVCGVDL AVRSGQTVAV VGESGSGKST TAAAILGLLP AGGRITAGRV VFDGRDITGA DAKRLRSIRG REIGYVPQDP MTNLNPVWKV GFQVTEALRA NTDGRAARRR AVELLAEAGL PDPAKQAGRY PHQLSGGMCQ RALIAIGLAG RPRLLIADEP TSALDVTVQR QVLDHLQGLT DELGTALLLI THDLALAAQR AEAVVVVRRG VVVESGAAQS ILQSPQHEYT RRLVAAAPSL TARSRRPPES RSRATTQAGD ILVVSELTKI YRESRGAPWR RVESRAVDGV SFRLPRASTL AIVGESGSGK STLARMVLGL LQPTSGTVVF DGTYDVGALA RDQVLAFRRR VQPVFQNPYS SLDPMYSVFR AIEEPLRVHH VGDRRQRQRA VRELVDQVAL PSSILGRRPR ELSGGQRQRV AIARALALRP EVLVCDEAVS ALDVLVQAQI LDLLADLQAD LGLTYLFISH DLAVIRQIAD DVLVMRAGRV VEHASTEEVF SRPRHEYTRQ LLQAIPGAPS APRKVGNL
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