Gene TBFG_13462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13462 
Symbol 
ID5224151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3858440 
End bp3858982 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content59% 
IMG OID640608231 
ProductPPE family protein 
Protein accessionYP_001289389 
Protein GI148824635 
COG category[N] Cell motility 
COG ID[COG5651] PPE-repeat proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones270 
Plasmid unclonability p-value0.00000000119714 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones156 
Fosmid unclonability p-value0.000040288 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTTTCA CATTGACACC AGCGCACCAG ATCTCCTACC AAATGTATGC CGGCCCCGGT 
GCTGACTCAA TGCGCGCAGC CTCCCAGCAG TTACGAGAAT TGGCTTTCTC AGCTGATACG
ACGGCCGACT CGCTCAACGA CACGCTCTTC GACCTAGATG ATACCTGGAT AGGTGGGTCG
TCGGCGTTCA TGACCGACGC GGCTTTGCGT TATCTCAAAT GGCTGTCTAA ACACTCCAAA
CGGCTTTGGC AAACCGCCAA CACCATCCAC CACCTCGCGA ACACCTATGA GGATATACGT
CAGCGGGTGG TACCCCCGGC GGCCATCGAA GACAACCGCG AGGAGGTGCG CAGGCTGATC
GCGAGCGACA TAACCGGGGA AAACGCTCCG GCAATCGCAG AACTCGACGA ACAATATCAG
TCGTACGGGG ACACCAATGT GCAAGCAATG AACCTCTATG CAGAGCGCGC GCAGACTCTG
CTATCGCAGC TGCCCCGGTG GCAGGAGCCG CCGCAGATCC ACCAGAGGGG TAGGGGCGGG
TAG
 
Protein sequence
MPFTLTPAHQ ISYQMYAGPG ADSMRAASQQ LRELAFSADT TADSLNDTLF DLDDTWIGGS 
SAFMTDAALR YLKWLSKHSK RLWQTANTIH HLANTYEDIR QRVVPPAAIE DNREEVRRLI
ASDITGENAP AIAELDEQYQ SYGDTNVQAM NLYAERAQTL LSQLPRWQEP PQIHQRGRGG