Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13457 |
Symbol | alr |
ID | 5224146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 3851486 |
End bp | 3852712 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640608226 |
Product | alanine racemase |
Protein accession | YP_001289384 |
Protein GI | 148824630 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 284 |
Plasmid unclonability p-value | 0.0132184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 158 |
Fosmid unclonability p-value | 0.000185138 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAACGGT TCTGGGAGAA TGTCGGAAAG CCAAACGACA CGACAGATGG GCGGGGCACG ACTTCGTTGG CCATGACACC GATATCCCAG ACACCTGGCC TCCTCGCCGA GGCCATGGTG GATCTGGGCG CTATTGAACA CAACGTGCGG GTGCTGCGTG AGCACGCCGG CCACGCGCAG CTGATGGCGG TGGTCAAGGC CGACGGCTAC GGTCACGGTG CTACGCGCGT CGCCCAAACC GCCCTGGGAG CCGGTGCGGC CGAACTCGGC GTCGCCACCG TCGACGAGGC GCTAGCGCTG CGCGCTGATG GCATTACCGC ACCGGTGCTG GCCTGGCTGC ATCCGCCCGG CATCGACTTC GGGCCCGCGC TGCTGGCCGA CGTGCAGGTC GCGGTGTCCT CGCTGCGCCA ACTCGACGAA CTGTTGCACG CGGTGCGCCG GACCGGCCGG ACGGCGACGG TGACCGTCAA GGTGGATACC GGGCTGAACC GCAATGGCGT GGGACCGGCA CAATTCCCGG CCATGCTGAC CGCGTTACGC CAAGCCATGG CCGAGGACGC CGTCCGGCTG CGGGGGCTGA TGTCGCATAT GGTTTACGCC GACAAGCCTG ACGATTCCAT CAACGATGTT CAGGCCCAAC GGTTTACCGC CTTTCTGGCG CAGGCCCGCG AACAAGGGGT GCGGTTCGAG GTGGCGCATC TATCGAACTC ATCAGCAACT ATGGCGCGCC CCGACCTGAC GTTCGACCTG GTGCGGCCGG GCATCGCGGT GTATGGGCTA AGCCCGGTAC CCGCCCTCGG TGACATGGGG CTGGTGCCGG CGATGACCGT GAAATGTGCT GTTGCGCTGG TGAAATCGAT TCGTGCGGGG GAGGGCGTGT CGTATGGGCA CACATGGATC GCGCCACGCG ACACCAATCT GGCGCTGCTG CCGATCGGTT ACGCAGACGG CGTGTTCCGG TCGCTGGGCG GGCGGCTGGA GGTGCTGATC AACGGCAGAC GATGCCCCGG TGTGGGGCGG ATCTGCATGG ACCAGTTCAT GGTCGACCTG GGCCCCGGGC CGCTTGATGT GGCCGAAGGC GACGAGGCGA TTTTGTTCGG GCCGGGCATC CGGGGTGAGC CCACGGCTCA GGACTGGGCC GATCTTGTCG GCACCATCCA CTACGAAGTG GTCACCAGCC CGCGAGGACG TATCACCAGG ACCTATCGCG AGGCTGAAAA CCGTTGA
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Protein sequence | MKRFWENVGK PNDTTDGRGT TSLAMTPISQ TPGLLAEAMV DLGAIEHNVR VLREHAGHAQ LMAVVKADGY GHGATRVAQT ALGAGAAELG VATVDEALAL RADGITAPVL AWLHPPGIDF GPALLADVQV AVSSLRQLDE LLHAVRRTGR TATVTVKVDT GLNRNGVGPA QFPAMLTALR QAMAEDAVRL RGLMSHMVYA DKPDDSINDV QAQRFTAFLA QAREQGVRFE VAHLSNSSAT MARPDLTFDL VRPGIAVYGL SPVPALGDMG LVPAMTVKCA VALVKSIRAG EGVSYGHTWI APRDTNLALL PIGYADGVFR SLGGRLEVLI NGRRCPGVGR ICMDQFMVDL GPGPLDVAEG DEAILFGPGI RGEPTAQDWA DLVGTIHYEV VTSPRGRITR TYREAENR
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