| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13448 |
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| Symbol | |
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| ID | 5224137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3844330 |
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| End bp | 3844968 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640608217 |
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| Product | RNA polymerase sigma factor SigD |
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| Protein accession | YP_001289375 |
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| Protein GI | 148824621 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 308 |
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| Plasmid unclonability p-value | 0.000273686 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 184 |
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| Fosmid unclonability p-value | 0.0377693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCGATC CGGGAGTTAG CCCGGGATGT GTCCGCTTCG TAACGTTGGA GATATCGCCG
TCGATGACAA TGCAAGGGGA ACGTCTCGAC GCTGTGGTTG CGGAGGCCGT GGCAGGAGAC
CGGAACGCGC TTCGGGAGGT GCTGGAGACC ATCCGCCCGA TCGTCGTGCG ATATTGCCGA
GCGCGAGTCG GCACGGTCGA GCGGAGCGGC CTGTCAGCAG ATGACGTGGC ACAGGAGGTG
TGCTTGGCCA CCATAACGGC GCTGCCGCGC TATCGGGACC GCGGCCGGCC ATTCCTGGCG
TTTCTGTACG GCATCGCGGC GCACAAGGTT GCCGACGCCC ATCGGGCAGC CGGCCGTGAC
CGGGCCTATC CCGCCGAAAC GCTTCCTGAG CGCTGGTCAG CCGACGCCGG CCCGGAGCAG
ATGGCCATCG AGGCCGATTC GGTCACCCGG ATGAACGAAT TGCTTGAGAT CTTGCCGGCC
AAGCAACGCG AGATCCTCAT TCTGCGTGTT GTCGTCGGCC TGTCCGCGGA AGAGACCGCC
GCCGCCGTCG GCAGCACCAC GGGGGCGGTC CGGGTGGCCC AACACCGTGC ACTTCAGCGG
CTGAAGGACG AGATTGTTGC GGCAGGTGAC TATGCGTGA
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| Protein sequence | MVDPGVSPGC VRFVTLEISP SMTMQGERLD AVVAEAVAGD RNALREVLET IRPIVVRYCR
ARVGTVERSG LSADDVAQEV CLATITALPR YRDRGRPFLA FLYGIAAHKV ADAHRAAGRD
RAYPAETLPE RWSADAGPEQ MAIEADSVTR MNELLEILPA KQREILILRV VVGLSAEETA
AAVGSTTGAV RVAQHRALQR LKDEIVAAGD YA
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