| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13349 |
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| Symbol | sdhA |
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| ID | 5224038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 3716657 |
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| End bp | 3718429 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640608118 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001289276 |
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| Protein GI | 148824522 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 286 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 194 |
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| Fosmid unclonability p-value | 0.287952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCTGCC AACACCGATA CGACGTGGTG ATCGTCGGCG CGGGCGGTGC CGGGATGCGC
GCCGCGGTCG AGGCGGGTCC GCGGGTGCGT ACCGCGGTGC TGACCAAGCT GTATCCCACC
CGCAGCCACA CCGGCGCGGC CCAGGGCGGC ATGTGCGCCG CGCTGGCCAA CGTCGAGGAC
GACAACTGGG AGTGGCACAC GTTCGACACC GTCAAGGGCG GCGACTATCT CGCCGACCAG
GACGCCGTGG AGATCATGTG CAAGGAAGCC ATCGACGCGG TGCTCGACCT GGAGAAGATG
GGGATGCCGT TCAACCGCAC CCCCGAGGGC CGCATCGACC AGCGCCGCTT CGGCGGGCAC
ACCCGCGACC ACGGCAAGGC CCCGGTGCGC CGGGCCTGCT ACGCGGCCGA TCGCACCGGC
CACATGATTC TGCAGACGCT GTATCAGAAC TGCGTCAAGC ACGACGTCGA GTTCTTCAAC
GAGTTTTACG CGCTGGATTT GGCTTTGACT CAAACGCCGT CGGGCCCGGT GGCCACCGGG
GTGATCGCCT ACGAGCTAGC GACCGGTGAC ATCCATGTCT TTCACGCCAA GGCCGTCGTG
ATCGCGACCG GCGGCTCGGG CCGCATGTAT AAGACCACGT CCAACGCACA CACCCTGACC
GGCGACGGCA TCGGCATCGT GTTCCGCAAG GGACTTCCCT TGGAGGACAT GGAGTTTCAC
CAGTTTCACC CTACCGGCCT GGCCGGTCTG GGCATCTTAA TCTCCGAAGC GGTGCGCGGC
GAAGGCGGCC GGCTGCTCAA CGGGGAAGGT GAGCGTTTCA TGGAGCGCTA CGCCCCGACG
ATCGTCGACC TAGCGCCCCG CGACATCGTC GCCCGCTCGA TGGTGCTGGA AGTGCTGGAG
GGACGCGGCG CCGGACCGCT CAAGGACTAC GTCTACATCG ACGTCCGCCA CCTGGGCGAG
GAAGTGCTCG AGGCCAAGCT GCCCGACATC ACCGAGTTCG CCCGCACCTA CCTGGGCGTG
GATCCGGTCA CCGAGCTGGT GCCGGTCTAC CCGACGTGCC ACTACCTGAT GGGCGGCATC
CCGACCACAG TCACCGGGCA GGTGCTGCGG GACAACACCA GCGTTGTCCC GGGCCTGTAT
GCGGCCGGCG AGTGCGCGTG CGTGTCGGTG CATGGCGCCA ACCGGCTGGG CACCAACTCG
CTGTTGGATA TCAACGTCTT CGGTCGTCGG GCCGGCATCG CCGCCGCCAG TTATGCGCAG
GGTCACGACT TTGTCGACAT GCCGCCCAAC CCGGAGGCCA TGGTGGTGGG CTGGGTCAGC
GACATCCTGT CCGAACACGG AAACGAGCGG GTCGCCGACA TTCGCGGGGC GCTGCAGCAG
TCGATGGACA ACAACGCCGC GGTGTTCCGC ACCGAGGAGA CCCTGAAGCA GGCGCTCACC
GACATCCACG CGCTCAAGGA GCGCTACTCC CGAATCACGG TGCACGACAA GGGGAAACGC
TTCAACACCG ACCTGCTGGA AGCCATCGAG CTGGGATTTT TACTGGAGCT GGCCGAGGTC
ACGGTGGTCG GCGCTTTGAA TCGCAAGGAG TCCCGCGGCG GTCACGCCCG CGAGGACTAT
CCCAACCGCG ACGACGTCAA CTACATGCGA CACACCATGG CCTACAAGGA AATTGGGGCC
GATAAGGAGG GCCCCGAGCT GCGCAGCGAT GTCCGCCTTG ATTTCAAACC CGTCGTGCAG
ACCCGTTACG AACCCAAGGA ACGGAAGTAC TAA
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| Protein sequence | MICQHRYDVV IVGAGGAGMR AAVEAGPRVR TAVLTKLYPT RSHTGAAQGG MCAALANVED
DNWEWHTFDT VKGGDYLADQ DAVEIMCKEA IDAVLDLEKM GMPFNRTPEG RIDQRRFGGH
TRDHGKAPVR RACYAADRTG HMILQTLYQN CVKHDVEFFN EFYALDLALT QTPSGPVATG
VIAYELATGD IHVFHAKAVV IATGGSGRMY KTTSNAHTLT GDGIGIVFRK GLPLEDMEFH
QFHPTGLAGL GILISEAVRG EGGRLLNGEG ERFMERYAPT IVDLAPRDIV ARSMVLEVLE
GRGAGPLKDY VYIDVRHLGE EVLEAKLPDI TEFARTYLGV DPVTELVPVY PTCHYLMGGI
PTTVTGQVLR DNTSVVPGLY AAGECACVSV HGANRLGTNS LLDINVFGRR AGIAAASYAQ
GHDFVDMPPN PEAMVVGWVS DILSEHGNER VADIRGALQQ SMDNNAAVFR TEETLKQALT
DIHALKERYS RITVHDKGKR FNTDLLEAIE LGFLLELAEV TVVGALNRKE SRGGHAREDY
PNRDDVNYMR HTMAYKEIGA DKEGPELRSD VRLDFKPVVQ TRYEPKERKY
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