| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13299 |
|---|
| Symbol | |
|---|
| ID | 5223988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 3662304 |
|---|
| End bp | 3664460 |
|---|
| Gene Length | 2157 bp |
|---|
| Protein Length | 718 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640608068 |
|---|
| Product | metal cation transporter P-type ATPase C ctpC |
|---|
| Protein accession | YP_001289226 |
|---|
| Protein GI | 148824472 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 241 |
|---|
| Plasmid unclonability p-value | 0.685827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 206 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGG AAGTGGTATC GGACGCGGCC GGACGCATGC GGGTCAAAGT CGACTGGGTC
CGTTGCGATT CCCGGCGCGC GGTCGCGGTC GAAGAGGCCG TTGCCAAGCA GAACGGTGTG
CGCGTCGTGC ACGCCTACCC GCGCACCGGG TCCGTGGTCG TGTGGTATTC ACCCAGACGC
GCCGACCGCG CGGCGGTGCT GGCGGCGATC AAGGGCGCCG CGCACGTCGC CGCCGAACTG
ATCCCCGCGC GTGCGCCGCA CTCGGCCGAG ATCCGCAACA CCGACGTGCT CCGGATGGTC
ATCGGCGGGG TGGCACTGGC CTTGCTCGGG GTGCGCCGCT ACGTGTTCGC GCGGCCACCG
CTGCTCGGAA CCACCGGGCG GACGGTGGCC ACCGGTGTCA CCATTTTCAC CGGGTATCCG
TTCCTGCGTG GCGCGCTGCG CTCGCTGCGC TCCGGAAAGG CCGGCACCGA TGCCCTGGTC
TCCGCGGCGA CGGTGGCAAG CCTCATCCTG CGCGAGAACG TGGTCGCACT CACCGTCCTG
TGGTTGCTCA ACATCGGTGA GTACCTGCAG GATCTGACGC TGCGGCGGAC CCGGCGGGCC
ATCTCGGAGC TGCTGCGCGG CAACCAGGAC ACGGCCTGGG TGCGCCTCAC CGATCCTTCT
GCAGGCTCCG ACGCGGCCAC CGAAATCCAG GTCCCGATCG ACACCGTGCA GATCGGTGAC
GAGGTGGTGG TCCACGAGCA CGTCGCGATA CCGGTCGACG GTGAGGTGGT CGACGGCGAA
GCGATCGTCA ATCAGTCCGC GATCACCGGG GAAAACCTGC CGGTCAGCGT CGTGGTCGGA
ACGCGCGTGC ACGCCGGTTC GGTCGTGGTG CGCGGACGCG TGGTGGTGCG CGCCCACGCG
GTAGGCAACC AAACCACCAT CGGTCGCATC ATTAGCAGGG TCGAAGAGGC TCAGCTCGAC
CGGGCACCCA TCCAGACGGT GGGCGAGAAC TTCTCCCGCC GCTTCGTTCC CACCTCGTTC
ATCGTCTCGG CCATCGCGTT GCTGATCACC GGCGACGTGC GGCGCGCGAT GACCATGTTG
TTGATCGCAT GCCCGTGCGC GGTGGGACTG TCCACCCCGA CCGCGATCAG CGCAGCGATC
GGCAACGGCG CGCGCCGTGG CATCCTGATC AAGGGCGGAT CCCACCTCGA GCAGGCGGGC
CGCGTCGACG CCATCGTGTT CGACAAGACC GGGACGTTGA CCGTGGGCCG CCCCGTGGTC
ACCAATATCG TTGCCATGCA TAAAGATTGG GAGCCCGAGC AAGTGCTGGC CTATGCCGCC
AGCTCGGAGA TCCACTCACG TCATCCGCTG GCCGAGGCGG TGATCCGCTC GACGGAGGAA
CGCCGCATCA GCATCCCACC ACACGAGGAG TGCGAGGTGC TGGTCGGCCT GGGCATGCGG
ACCTGGGCCG ACGGTCGGAC CCTGCTGCTG GGCAGTCCGT CGTTGCTGCG CGCCGAAAAA
GTTCGGGTGT CCAAGAAGGC GTCGGAGTGG GTCGACAAGC TGCGCCGCCA GGCGGAGACC
CCGCTGCTGC TCGCGGTGGA CGGCACGCTG GTCGGCCTGA TCAGCCTGCG CGACGAGGTG
CGTCCGGAGG CGGCCCAGGT GCTGACGAAG CTGCGGGCCA ATGGGATTCG CCGGATCGTC
ATGCTCACCG GCGACCACCC GGAGATCGCC CAGGTTGTCG CCGACGAACT GGGGATTGAT
GAGTGGCGCG CCGAGGTCAT GCCGGAGGAC AAGCTCGCGG CGGTGCGCGA GCTGCAGGAC
GACGGCTACG TCGTCGGGAT GGTCGGCGAC GGCATCAACG ACGCCCCGGC GCTGGCCGCC
GCCGATATCG GGATCGCCAT GGGCCTTGCC GGAACCGACG TCGCCGTCGA GACCGCCGAT
GTCGCGCTGG CCAACGACGA CCTGCACCGC CTGCTCGACG TTGGGGACCT GGGCGAGCGG
GCAGTGGATG TAATCCGGCA GAACTACGGC ATGTCCATCG CCGTCAACGC GGCCGGGCTG
CTGATCGGCG CGGGCGGTGC GCTCTCGCCG GTGCTGGCGG CGATCCTGCA CAACGCGTCG
TCGGTGGCGG TGGTGGCCAA CAGTTCCCGG TTGATCCGCT ACCGCCTGGA CCGCTAG
|
|---|
| Protein sequence | MTLEVVSDAA GRMRVKVDWV RCDSRRAVAV EEAVAKQNGV RVVHAYPRTG SVVVWYSPRR
ADRAAVLAAI KGAAHVAAEL IPARAPHSAE IRNTDVLRMV IGGVALALLG VRRYVFARPP
LLGTTGRTVA TGVTIFTGYP FLRGALRSLR SGKAGTDALV SAATVASLIL RENVVALTVL
WLLNIGEYLQ DLTLRRTRRA ISELLRGNQD TAWVRLTDPS AGSDAATEIQ VPIDTVQIGD
EVVVHEHVAI PVDGEVVDGE AIVNQSAITG ENLPVSVVVG TRVHAGSVVV RGRVVVRAHA
VGNQTTIGRI ISRVEEAQLD RAPIQTVGEN FSRRFVPTSF IVSAIALLIT GDVRRAMTML
LIACPCAVGL STPTAISAAI GNGARRGILI KGGSHLEQAG RVDAIVFDKT GTLTVGRPVV
TNIVAMHKDW EPEQVLAYAA SSEIHSRHPL AEAVIRSTEE RRISIPPHEE CEVLVGLGMR
TWADGRTLLL GSPSLLRAEK VRVSKKASEW VDKLRRQAET PLLLAVDGTL VGLISLRDEV
RPEAAQVLTK LRANGIRRIV MLTGDHPEIA QVVADELGID EWRAEVMPED KLAAVRELQD
DGYVVGMVGD GINDAPALAA ADIGIAMGLA GTDVAVETAD VALANDDLHR LLDVGDLGER
AVDVIRQNYG MSIAVNAAGL LIGAGGALSP VLAAILHNAS SVAVVANSSR LIRYRLDR
|
|---|
| |