Gene TBFG_13168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13168 
Symbol 
ID5223856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3525751 
End bp3526461 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID640607936 
ProductNADH dehydrogenase subunit C 
Protein accessionYP_001289095 
Protein GI148824341 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones421 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones232 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGC CGAACCAAGA CGCCCAGGAA GGCCGCCCGG ACTCCCCCAC CGCGGAGGTG 
GTCGACGTTC GCCGCGGCAT GTTCGGCGTC TCGGGCACCG GTGACACCTC CGGTTACGGA
CGGTTGGTGC GCCAAGTCGT CCTCCCTGGC AGCAGCCCCC GGCCCTACGG CGGCTACTTC
GACGATATCG TCGACCGGCT GGCCGAGGCA CTGCGGCACG AGCGCGTCGA ATTCGAGGAC
GCCGTCGAGA AAGTCGTGGT CTACCGCGAT GAACTGACCC TGCACGTCCG CCGGGATCTA
CTGCCGCGGG TCGCCCAGCG GCTGCGCGAC GAACCCGAAT TGCGATTCGA GCTGTGTCTT
GGGGTGAGCG GGGTGCACTA CCCGCACGAG ACGGGTCGGG AGCTGCATGC CGTCTACCCG
CTGCAGTCGA TCACCCACAA CCGTCGCCTC CGGTTGGAAG TGTCTGCGCC GGACAGTGAT
CCGCACATCC CTTCCCTGTT CGCGATCTAT CCGACCAACG ACTGGCACGA GCGGGAAACC
TACGACTTCT TCGGGATCAT CTTCGACGGC CATCCGGCCC TGACCCGGAT CGAGATGCCC
GATGACTGGC AGGGGCATCC GCAACGCAAG GACTACCCTC TCGGCGGCAT CCCGGTCGAA
TACAAGGGCG CGCAGATACC CCCGCCCGAC GAGCGGAGGG GCTACAACTG A
 
Protein sequence
MSPPNQDAQE GRPDSPTAEV VDVRRGMFGV SGTGDTSGYG RLVRQVVLPG SSPRPYGGYF 
DDIVDRLAEA LRHERVEFED AVEKVVVYRD ELTLHVRRDL LPRVAQRLRD EPELRFELCL
GVSGVHYPHE TGRELHAVYP LQSITHNRRL RLEVSAPDSD PHIPSLFAIY PTNDWHERET
YDFFGIIFDG HPALTRIEMP DDWQGHPQRK DYPLGGIPVE YKGAQIPPPD ERRGYN