Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13079 |
Symbol | ligB |
ID | 5223767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 3437348 |
End bp | 3438871 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640607847 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_001289008 |
Protein GI | 148824254 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
Num covering plasmid clones | 354 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 211 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCCTTC ACGACGTGGC CATCACCTCA ATGGACGTGG CCGCCACCTC GTCGCGGCTG ACCAAGGTCG CGCGCATCGC CGCCCTGTTG CACCGCGCCG CGCCAGACAC ACAGCTGGTC ACGATCATCG TGTCGTGGCT CTCCGGCGAG CTGCCGCAAC GCCATATCGG TGTCGGGTGG GCGGCATTGC GGTCCCTACC GCCGCCCGCG CCGCAACCGG CGTTGACCGT CACCGGTGTC GACGCCACCC TCTCTAAGAT CGGCACTCTA TCGGGCAAAG GGTCTCAGGC GCAGCGCGCG GCACTCGTTG CGGAATTGTT CTCCGCCGCA ACCGAAGCTG AGCAAACCTT TTTGTTGCGA CTGCTCGGCG GTGAACTGCG CCAGGGCGCA AAGGGCGGGA TCATGGCCGA TGCGGTCGCC CAGGCCGCCG GGCTCCCGGC CGCGACGGTC CAACGCGCCG CGATGCTAGG CGGCGACCTG GCGGCAGCGG CGGCGGCCGG CCTGTCCGGC GCGGCGCTGG ACACCTTCAC CCTGCGAGTG GGCCGACCGA TAGGCCCGAT GCTGGCACAG ACCGCGACCA GCGTCCATGA TGCACTCGAA CGTCACGGCG GCACAACCAT TTTCGAGGCT AAACTAGACG GCGCGCGAGT GCAGATCCAC CGGGCAAACG ACCAGGTCAG GATCTACACC CGAAGCCTGG ACGACGTCAC TGCCCGGCTG CCCGAGGTGG TGGAGGCAAC ACTGGCACTG CCGGTCCGGG ATCTAGTGGC CGACGGCGAG GCGATCGCGC TGTGCCCGGA CAACCGGCCG CAGCGTTTCC AGGTCACCGC ATCACGGTTC GGCCGATCGG TCGATGTTGC GGCTGCCCGC GCGACGCAGC CACTTTCGGT GTTCTTCTTC GACATCCTGC ATCGGGATGG TACCGACTTG CTCGAAGCGC CGACCACCGA GCGGCTGGCC GCCCTGGACG CACTGGTGCC GGCTCGGCAC CGCGTGGACC GGCTGATCAC GTCCGATCCA ACGGACGCGG CCAACTTCCT GGATGCGACG CTGGCCGCCG GCCACGAGGG GGTGATGGCC AAGGCACCGG CCGCTCGTTA CCTTGCGGGT CGCCGCGGAG CGGGCTGGCT GAAGGTCAAG CCGGTGCACA CACTCGACTT GGTGGTGCTC GCGGTGGAAT GGGGCTCGGG ACGCCGGCGC GGCAAGCTCT CGAATATTCA CCTGGGCGCA CGCGATCCGG CTACCGGTGG ATTCGTGATG GTGGGCAAGA CCTTCAAAGG AATGACCGAC GCCATGCTGG ACTGGCAGAC CACCAGGTTT CACGAGATCG CGGTGGGTCC GACAGACGGC TACGTCGTCC AACTTAGGCC CGAGCAGGTG GTCGAGGTAG CCCTCGACGG CGTGCAAAGG TCGTCGCGCT ACCCGGGCGG GCTGGCATTG CGGTTTGCCC GCGTGGTGCG CTACCGCGCC GACAAGGACC CGGCCGAGGC CGACACCATC GATGCCGTGC GCGCGCTCTA CTGA
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Protein sequence | MLLHDVAITS MDVAATSSRL TKVARIAALL HRAAPDTQLV TIIVSWLSGE LPQRHIGVGW AALRSLPPPA PQPALTVTGV DATLSKIGTL SGKGSQAQRA ALVAELFSAA TEAEQTFLLR LLGGELRQGA KGGIMADAVA QAAGLPAATV QRAAMLGGDL AAAAAAGLSG AALDTFTLRV GRPIGPMLAQ TATSVHDALE RHGGTTIFEA KLDGARVQIH RANDQVRIYT RSLDDVTARL PEVVEATLAL PVRDLVADGE AIALCPDNRP QRFQVTASRF GRSVDVAAAR ATQPLSVFFF DILHRDGTDL LEAPTTERLA ALDALVPARH RVDRLITSDP TDAANFLDAT LAAGHEGVMA KAPAARYLAG RRGAGWLKVK PVHTLDLVVL AVEWGSGRRR GKLSNIHLGA RDPATGGFVM VGKTFKGMTD AMLDWQTTRF HEIAVGPTDG YVVQLRPEQV VEVALDGVQR SSRYPGGLAL RFARVVRYRA DKDPAEADTI DAVRALY
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