| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13018 |
|---|
| Symbol | |
|---|
| ID | 5223706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 3372839 |
|---|
| End bp | 3374695 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640607786 |
|---|
| Product | acetolactate synthase 1 catalytic subunit |
|---|
| Protein accession | YP_001288947 |
|---|
| Protein GI | 148824193 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 233 |
|---|
| Plasmid unclonability p-value | 0.0170383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 195 |
|---|
| Fosmid unclonability p-value | 0.298126 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCAC CAACCAAGCC ACACTCACCG ACATTCAAGC CAGAGCCACA CAGCGCGGCG
AATGAGCCAA AGCACCCGGC GGCTCGTCCG AAACATGTTG CACTGCAGCA GCTTACCGGT
GCACAGGCGG TCATCCGGTC GCTGGAGGAA CTCGGCGTCG ACGTCATTTT CGGGATTCCG
GGCGGTGCGG TGCTGCCGGT GTATGACCCG CTGTTCGACT CGAAAAAGCT GCGCCACGTG
CTGGTCCGCC ACGAACAGGG CGCCGGGCAT GCCGCCAGCG GCTACGCGCA CGTCACCGGC
CGGGTGGGCG TGTGCATGGC AACGTCGGGT CCCGGAGCGA CCAACCTGGT GACCCCGCTG
GCCGACGCGC AGATGGACTC GATCCCGGTG GTCGCTATCA CCGGTCAGGT CGGGCGGGGG
CTGATCGGCA CCGACGCCTT CCAGGAGGCC GACATCTCGG GCATCACGAT GCCGATCACC
AAGCACAACT TTCTGGTCCG CTCCGGTGAC GACATTCCGC GGGTGCTGGC CGAGGCCTTC
CACATCGCGG CCTCCGGCCG TCCGGGCGCG GTGCTGGTCG ACATCCCCAA GGACGTGCTG
CAGGGCCAGT GCACGTTCAG CTGGCCGCCG CGGATGGAGC TGCCCGGCTA CAAGCCCAAC
ACCAAACCGC ACAGCCGGCA GGTCCGCGAG GCCGCCAAGC TGATCGCGGC CGCGCGCAAG
CCGGTGCTGT ATGTCGGCGG CGGCGTCATC CGCGGTGAGG CCACCGAGCA GCTCCGGGAG
CTGGCCGAGC TGACCGGCAT CCCGGTGGTC ACCACGCTGA TGGCCCGCGG CGCGTTTCCC
GACAGCCACC GGCAAAACCT CGGCATGCCC GGCATGCACG GCACGGTGGC CGCCGTGGCG
GCGCTGCAGC GCAGCGACCT GCTGATCGCG CTGGGTACCC GCTTCGACGA CCGGGTGACC
GGCAAGCTCG ACTCGTTCGC GCCGGAAGCC AAGGTCATCC ACGCCGACAT CGACCCGGCC
GAGATCGGCA AGAACCGCCA CGCCGACGTG CCCATCGTCG GTGACGTCAA GGCCGTCATC
ACCGAACTGA TCGCGATGCT GCGCCACCAC CACATTCCCG GCACCATCGA GATGGCCGAC
TGGTGGGCAT ACCTGAACGG TGTGCGCAAG ACCTATCCGC TGAGCTATGG GCCGCAGAGC
GACGGCAGCC TGAGCCCGGA ATACGTGATC GAAAAGCTCG GCGAGATCGC CGGGCCGGAC
GCCGTCTTCG TCGCCGGCGT CGGCCAGCAC CAGATGTGGG CCGCGCAGTT CATCAGATAC
GAAAAGCCGC GCAGCTGGCT GAACTCCGGC GGTCTGGGCA CCATGGGGTT TGCCATCCCG
GCGGCCATGG GCGCCAAGAT CGCCCTCCCC GGCACCGAGG TCTGGGCGAT CGACGGCGAC
GGTTGCTTCC AGATGACCAA CCAGGAGCTG GCCACCTGCG CGGTCGAGGG CATACCGGTC
AAGGTGGCGC TGATCAACAA CGGCAACCTG GGCATGGTGC GGCAGTGGCA GAGCCTGTTC
TATGCCGAGC GGTACTCGCA GACCGACCTG GCCACTCATT CGCACCGCAT CCCCGACTTC
GTGAAACTGG CCGAGGCCTT GGGGTGTGTG GGGTTGCGGT GCGAGCGGGA AGAGGACGTC
GTCGACGTCA TCAACCAGGC GCGGGCGATC AACGACTGCC CGGTGGTGAT CGACTTCATC
GTCGGTGCCG ACGCGCAAGT GTGGCCGATG GTGGCCGCGG GCACCAGCAA TGACGAGATC
CAGGCCGCCC GCGGCATTCG CCCCCTGTTC GACGACATCA CCGAAGGCCA CGCCTGA
|
|---|
| Protein sequence | MSAPTKPHSP TFKPEPHSAA NEPKHPAARP KHVALQQLTG AQAVIRSLEE LGVDVIFGIP
GGAVLPVYDP LFDSKKLRHV LVRHEQGAGH AASGYAHVTG RVGVCMATSG PGATNLVTPL
ADAQMDSIPV VAITGQVGRG LIGTDAFQEA DISGITMPIT KHNFLVRSGD DIPRVLAEAF
HIAASGRPGA VLVDIPKDVL QGQCTFSWPP RMELPGYKPN TKPHSRQVRE AAKLIAAARK
PVLYVGGGVI RGEATEQLRE LAELTGIPVV TTLMARGAFP DSHRQNLGMP GMHGTVAAVA
ALQRSDLLIA LGTRFDDRVT GKLDSFAPEA KVIHADIDPA EIGKNRHADV PIVGDVKAVI
TELIAMLRHH HIPGTIEMAD WWAYLNGVRK TYPLSYGPQS DGSLSPEYVI EKLGEIAGPD
AVFVAGVGQH QMWAAQFIRY EKPRSWLNSG GLGTMGFAIP AAMGAKIALP GTEVWAIDGD
GCFQMTNQEL ATCAVEGIPV KVALINNGNL GMVRQWQSLF YAERYSQTDL ATHSHRIPDF
VKLAEALGCV GLRCEREEDV VDVINQARAI NDCPVVIDFI VGADAQVWPM VAAGTSNDEI
QAARGIRPLF DDITEGHA
|
|---|
| |